Calcium in PDB 2bbm: Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr)

The binding sites of Calcium atom in the Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr) (pdb code 2bbm). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr), PDB code: 2bbm:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca181 b:1.1 occ:1.00 OD1 A:ASP20 1.7 1.5 1.0 OD1 A:ASP24 1.7 1.9 1.0 OE1 A:GLU31 1.9 2.1 1.0 CD A:GLU31 2.0 1.4 1.0 OE2 A:GLU31 2.0 1.7 1.0 OD2 A:ASP22 2.4 1.5 1.0 H A:THR26 2.7 0.8 1.0 CG A:ASP20 2.9 1.1 1.0 CG A:ASP24 2.9 1.7 1.0 O A:THR26 3.0 0.5 1.0 H A:GLY25 3.1 1.1 1.0 CG A:GLU31 3.3 0.9 1.0 HG2 A:GLU31 3.5 1.3 1.0 OD2 A:ASP24 3.6 2.4 1.0 CG A:ASP22 3.6 1.4 1.0 OG1 A:THR26 3.6 0.8 1.0 OD2 A:ASP20 3.6 1.6 1.0 N A:THR26 3.6 0.6 1.0 HA A:ASP20 3.6 0.7 1.0 HG3 A:GLU31 3.7 1.4 1.0 H A:ASP24 3.7 1.4 1.0 N A:GLY25 3.9 1.0 1.0 CB A:ASP20 3.9 0.8 1.0 HB2 A:ASP20 3.9 1.0 1.0 HG1 A:THR26 3.9 1.2 1.0 HB2 A:ASP24 4.0 1.8 1.0 C A:THR26 4.0 0.4 1.0 HB2 A:ASP22 4.0 1.5 1.0 CB A:ASP24 4.0 1.5 1.0 H A:GLY23 4.1 1.3 1.0 H A:ASP22 4.2 0.9 1.0 CA A:ASP20 4.3 0.7 1.0 CA A:THR26 4.3 0.5 1.0 HB2 A:GLU31 4.3 0.8 1.0 CB A:ASP22 4.4 1.2 1.0 HG1 A:THR28 4.4 1.9 1.0 CB A:GLU31 4.4 0.7 1.0 OD1 A:ASP22 4.4 2.2 1.0 N A:ASP24 4.4 1.3 1.0 HA2 A:GLY25 4.6 0.9 1.0 C A:GLY25 4.6 0.8 1.0 CA A:GLY25 4.6 0.9 1.0 CA A:ASP24 4.6 1.4 1.0 CB A:THR26 4.6 0.6 1.0 C A:ASP24 4.7 1.2 1.0 HB A:THR28 4.7 1.2 1.0 H A:THR28 4.8 0.4 1.0 OG1 A:THR28 4.8 1.4 1.0 HB3 A:ASP20 4.8 1.1 1.0 HB3 A:ASP24 4.9 2.0 1.0 HB3 A:GLU31 4.9 0.9 1.0 H A:LYS21 4.9 0.9 1.0

Calcium binding site 2 out of 4 in the Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca182 b:1.0 occ:1.00 OD1 A:ASN60 2.1 1.6 1.0 OE2 A:GLU67 2.1 1.4 1.0 OD1 A:ASP58 2.2 1.6 1.0 OE1 A:GLU67 2.3 1.5 1.0 OD1 A:ASP56 2.4 1.1 1.0 CD A:GLU67 2.5 1.1 1.0 O A:THR62 3.0 0.5 1.0 CG A:ASP58 3.1 1.4 1.0 CG A:ASN60 3.2 1.3 1.0 HB2 A:ASP58 3.4 1.9 1.0 H A:GLY59 3.4 0.9 1.0 CG A:ASP56 3.4 0.8 1.0 H A:ASN60 3.5 1.1 1.0 HB2 A:ASN60 3.5 1.4 1.0 HA A:ILE63 3.7 0.6 1.0 OD2 A:ASP56 3.8 1.2 1.0 CB A:ASP58 3.8 1.4 1.0 H A:ASP58 3.8 1.2 1.0 CB A:ASN60 3.9 1.0 1.0 OD2 A:ASP58 3.9 2.1 1.0 CG A:GLU67 4.0 1.1 1.0 H A:THR62 4.2 0.5 1.0 C A:THR62 4.2 0.4 1.0 N A:ASN60 4.2 0.9 1.0 ND2 A:ASN60 4.2 2.1 1.0 HD22 A:ASN60 4.3 2.6 1.0 N A:GLY59 4.4 0.9 1.0 HA A:ASP56 4.4 0.7 1.0 HG3 A:GLU67 4.4 1.3 1.0 HG2 A:GLU67 4.5 1.3 1.0 H A:ASP64 4.5 0.5 1.0 N A:ASP58 4.5 1.0 1.0 CA A:ASN60 4.6 0.9 1.0 HB3 A:ASP58 4.6 1.9 1.0 H A:GLY61 4.7 0.7 1.0 HB2 A:GLU67 4.7 0.7 1.0 CA A:ILE63 4.7 0.5 1.0 CA A:ASP58 4.7 1.1 1.0 HB3 A:ASN60 4.8 1.3 1.0 CB A:ASP56 4.8 0.8 1.0 H A:ALA57 4.8 1.0 1.0 OD2 A:ASP64 4.8 2.0 1.0 CB A:GLU67 4.8 0.7 1.0 HB3 A:GLU67 4.9 0.8 1.0 N A:THR62 4.9 0.5 1.0 N A:ILE63 4.9 0.4 1.0

Calcium binding site 3 out of 4 in the Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca183 b:0.9 occ:1.00 OD1 A:ASN97 1.7 2.1 1.0 OE1 A:GLU104 2.0 1.7 1.0 OD1 A:ASP95 2.0 1.7 1.0 OE2 A:GLU104 2.3 1.4 1.0 OD1 A:ASP93 2.3 1.2 1.0 CD A:GLU104 2.3 1.0 1.0 CG A:ASN97 2.8 1.7 1.0 CG A:ASP95 3.1 1.6 1.0 O A:PHE99 3.2 0.5 1.0 H A:ASN97 3.3 1.2 1.0 CG A:ASP93 3.3 0.7 1.0 HB2 A:ASN97 3.4 2.0 1.0 H A:GLY96 3.6 2.1 1.0 CB A:ASN97 3.7 1.5 1.0 H A:GLY98 3.7 1.0 1.0 ND2 A:ASN97 3.7 2.5 1.0 HD22 A:ASN97 3.7 3.1 1.0 CG A:GLU104 3.8 0.9 1.0 OD2 A:ASP93 3.8 1.1 1.0 OD2 A:ASP95 3.8 2.4 1.0 HB2 A:ASP95 4.0 1.9 1.0 HG2 A:GLU104 4.0 1.6 1.0 HA A:ASP93 4.0 0.6 1.0 N A:ASN97 4.2 1.1 1.0 CB A:ASP95 4.2 1.5 1.0 H A:ASP95 4.2 1.2 1.0 HG3 A:GLU104 4.3 1.5 1.0 HA A:ILE100 4.3 0.4 1.0 C A:PHE99 4.4 0.5 1.0 H A:PHE99 4.4 0.9 1.0 HB3 A:ASN97 4.5 2.0 1.0 CA A:ASN97 4.5 1.3 1.0 N A:GLY96 4.6 1.5 1.0 N A:GLY98 4.6 0.9 1.0 CB A:ASP93 4.6 0.6 1.0 HD21 A:ASN97 4.6 2.8 1.0 HB2 A:SER101 4.6 1.2 1.0 HB3 A:GLU104 4.7 1.0 1.0 CA A:ASP93 4.7 0.5 1.0 CB A:GLU104 4.7 0.6 1.0 H A:SER101 4.8 0.4 1.0 N A:ASP95 4.8 1.1 1.0 N A:PHE99 4.9 0.7 1.0 HB2 A:GLU104 4.9 0.9 1.0 HB3 A:ASP95 5.0 1.9 1.0 CA A:ASP95 5.0 1.2 1.0

Calcium binding site 4 out of 4 in the Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca184 b:0.9 occ:1.00 OD1 A:ASP129 1.8 1.6 1.0 OD2 A:ASP133 1.9 1.8 1.0 OE1 A:GLU140 2.1 1.4 1.0 CG A:ASP129 2.4 1.1 1.0 OD2 A:ASP129 2.4 1.3 1.0 OE2 A:GLU140 2.5 1.4 1.0 CD A:GLU140 2.5 0.8 1.0 OD1 A:ASP131 2.7 1.2 1.0 HB2 A:ASP133 2.8 1.8 1.0 CG A:ASP133 2.9 1.4 1.0 O A:GLN135 3.1 0.6 1.0 H A:ASP133 3.3 1.2 1.0 CB A:ASP133 3.4 1.2 1.0 HA A:ASP129 3.6 0.9 1.0 H A:GLY134 3.7 1.0 1.0 CG A:ASP131 3.7 1.1 1.0 CB A:ASP129 3.8 0.9 1.0 HA A:VAL136 3.9 0.5 1.0 H A:GLY132 4.0 1.9 1.0 CG A:GLU140 4.0 0.9 1.0 OD1 A:ASP133 4.0 2.0 1.0 N A:ASP133 4.1 1.2 1.0 HB3 A:ASP133 4.1 1.7 1.0 OD2 A:ASP131 4.2 1.7 1.0 CA A:ASP129 4.2 0.8 1.0 C A:GLN135 4.3 0.6 1.0 HG3 A:GLU140 4.3 1.4 1.0 CA A:ASP133 4.3 1.2 1.0 H A:ASN137 4.3 0.7 1.0 H A:GLN135 4.4 0.9 1.0 HB2 A:ASP129 4.4 1.2 1.0 HB3 A:ASP129 4.4 1.2 1.0 H A:ASP131 4.4 1.1 1.0 HG2 A:GLU140 4.5 1.3 1.0 N A:GLY134 4.5 1.0 1.0 HB2 A:ASN137 4.5 1.2 1.0 H A:ILE130 4.6 1.0 1.0 N A:GLN135 4.8 0.7 1.0 HB2 A:GLU140 4.8 1.0 1.0 CA A:VAL136 4.9 0.5 1.0 C A:ASP133 4.9 1.2 1.0 N A:GLY132 4.9 1.5 1.0 CB A:GLU140 4.9 0.8 1.0 HB2 A:ASP131 4.9 1.7 1.0 CB A:ASP131 5.0 1.4 1.0 N A:ASN137 5.0 0.6 1.0

M.Ikura, G.M.Clore, A.M.Gronenborn, G.Zhu, C.B.Klee, A.Bax. Solution Structure of A Calmodulin-Target Peptide Complex By Multidimensional uc(Nmr). Science V. 256 632 1992.
ISSN: ISSN 0036-8075
PubMed: 1585175