Calcium in PDB 2be6: 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Protein crystallography data
The structure of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex, PDB code: 2be6
was solved by
F.Van Petegem,
F.C.Chatelain,
D.L.Minor Jr.,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
20.00 /
2.00
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
84.731,
37.241,
86.860,
90.00,
97.77,
90.00
|
R / Rfree (%)
|
20.2 /
25.5
|
Other elements in 2be6:
The structure of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex also contains other interesting chemical elements:
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Calcium atom in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
(pdb code 2be6). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 12 binding sites of Calcium where determined in the
2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex, PDB code: 2be6:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 1 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca501
b:33.4
occ:1.00
|
OD1
|
A:ASP20
|
2.3
|
27.6
|
1.0
|
O
|
A:HOH507
|
2.3
|
34.5
|
1.0
|
OD1
|
A:ASP22
|
2.4
|
31.8
|
1.0
|
O
|
A:THR26
|
2.4
|
32.0
|
1.0
|
OE2
|
A:GLU31
|
2.4
|
31.9
|
1.0
|
OD2
|
A:ASP24
|
2.5
|
27.1
|
1.0
|
OE1
|
A:GLU31
|
2.5
|
31.5
|
1.0
|
CD
|
A:GLU31
|
2.8
|
31.4
|
1.0
|
CG
|
A:ASP22
|
3.2
|
29.5
|
1.0
|
CG
|
A:ASP24
|
3.4
|
30.7
|
1.0
|
CG
|
A:ASP20
|
3.5
|
30.2
|
1.0
|
OD2
|
A:ASP22
|
3.5
|
31.5
|
1.0
|
C
|
A:THR26
|
3.6
|
31.3
|
1.0
|
OD1
|
A:ASP24
|
4.0
|
30.8
|
1.0
|
CA
|
A:ASP20
|
4.2
|
29.4
|
1.0
|
N
|
A:THR26
|
4.2
|
30.4
|
1.0
|
N
|
A:ASP24
|
4.3
|
28.8
|
1.0
|
CB
|
A:ASP20
|
4.3
|
28.6
|
1.0
|
CG
|
A:GLU31
|
4.3
|
32.1
|
1.0
|
OD2
|
A:ASP20
|
4.3
|
29.9
|
1.0
|
CB
|
A:ASP24
|
4.4
|
29.3
|
1.0
|
OG1
|
A:THR26
|
4.4
|
35.6
|
1.0
|
N
|
A:ASP22
|
4.4
|
30.6
|
1.0
|
CA
|
A:THR26
|
4.4
|
31.3
|
1.0
|
C
|
A:ASP20
|
4.5
|
30.4
|
1.0
|
CB
|
A:ASP22
|
4.5
|
29.6
|
1.0
|
N
|
A:ILE27
|
4.5
|
30.7
|
1.0
|
CA
|
A:ILE27
|
4.6
|
29.7
|
1.0
|
N
|
A:GLY23
|
4.7
|
28.6
|
1.0
|
CA
|
A:ASP24
|
4.7
|
28.8
|
1.0
|
N
|
A:LYS21
|
4.7
|
31.2
|
1.0
|
O
|
A:HOH538
|
4.8
|
46.7
|
1.0
|
N
|
A:GLY25
|
4.8
|
29.5
|
1.0
|
CA
|
A:ASP22
|
4.8
|
29.1
|
1.0
|
CG2
|
A:THR28
|
4.8
|
28.3
|
1.0
|
N
|
A:THR28
|
4.9
|
28.9
|
1.0
|
O
|
A:ASP20
|
4.9
|
30.8
|
1.0
|
C
|
A:ASP24
|
5.0
|
29.1
|
1.0
|
|
Calcium binding site 2 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 2 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca502
b:38.6
occ:1.00
|
OD2
|
A:ASP56
|
2.3
|
32.3
|
1.0
|
O
|
A:HOH577
|
2.3
|
42.4
|
1.0
|
O
|
A:THR62
|
2.4
|
27.7
|
1.0
|
OE1
|
A:GLU67
|
2.5
|
27.0
|
1.0
|
OD1
|
A:ASN60
|
2.5
|
30.6
|
1.0
|
O
|
A:HOH552
|
2.5
|
48.5
|
1.0
|
OE2
|
A:GLU67
|
2.5
|
28.2
|
1.0
|
OD2
|
A:ASP58
|
2.5
|
27.5
|
1.0
|
CD
|
A:GLU67
|
2.9
|
28.3
|
1.0
|
CG
|
A:ASN60
|
3.3
|
31.2
|
1.0
|
CG
|
A:ASP56
|
3.4
|
34.8
|
1.0
|
CG
|
A:ASP58
|
3.5
|
32.6
|
1.0
|
C
|
A:THR62
|
3.5
|
28.6
|
1.0
|
ND2
|
A:ASN60
|
3.6
|
32.2
|
1.0
|
OD1
|
A:ASP58
|
3.9
|
33.7
|
1.0
|
OD1
|
A:ASP56
|
4.1
|
34.9
|
1.0
|
N
|
A:ASP64
|
4.2
|
28.5
|
1.0
|
O
|
A:HOH575
|
4.3
|
49.4
|
1.0
|
OD2
|
A:ASP64
|
4.3
|
33.0
|
1.0
|
CB
|
A:ASP56
|
4.3
|
34.4
|
1.0
|
CA
|
A:ILE63
|
4.3
|
28.5
|
1.0
|
N
|
A:ILE63
|
4.4
|
29.0
|
1.0
|
CG
|
A:GLU67
|
4.4
|
26.1
|
1.0
|
OG1
|
A:THR62
|
4.4
|
27.2
|
1.0
|
N
|
A:THR62
|
4.4
|
28.5
|
1.0
|
CG
|
A:ASP64
|
4.4
|
29.9
|
1.0
|
CA
|
A:THR62
|
4.5
|
28.1
|
1.0
|
CA
|
A:ASP56
|
4.5
|
34.7
|
1.0
|
N
|
A:ASN60
|
4.5
|
31.2
|
1.0
|
N
|
A:ASP58
|
4.6
|
32.8
|
1.0
|
CB
|
A:ASN60
|
4.6
|
31.2
|
1.0
|
C
|
A:ILE63
|
4.7
|
29.0
|
1.0
|
CB
|
A:ASP58
|
4.7
|
32.6
|
1.0
|
OD1
|
A:ASP64
|
4.7
|
31.6
|
1.0
|
N
|
A:GLY59
|
4.9
|
32.1
|
1.0
|
N
|
A:ALA57
|
4.9
|
33.9
|
1.0
|
C
|
A:ASP56
|
4.9
|
34.5
|
1.0
|
CB
|
A:ASP64
|
5.0
|
29.3
|
1.0
|
CA
|
A:ASP58
|
5.0
|
32.5
|
1.0
|
|
Calcium binding site 3 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 3 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca503
b:21.4
occ:1.00
|
OD2
|
A:ASP93
|
2.2
|
27.0
|
1.0
|
O
|
A:HOH508
|
2.3
|
30.7
|
1.0
|
O
|
A:TYR99
|
2.3
|
26.7
|
1.0
|
OD1
|
A:ASP95
|
2.4
|
30.3
|
1.0
|
OE2
|
A:GLU104
|
2.4
|
27.6
|
1.0
|
OD1
|
A:ASN97
|
2.4
|
28.2
|
1.0
|
OE1
|
A:GLU104
|
2.6
|
25.3
|
1.0
|
CD
|
A:GLU104
|
2.8
|
27.1
|
1.0
|
CG
|
A:ASP95
|
3.3
|
28.6
|
1.0
|
CG
|
A:ASP93
|
3.4
|
27.6
|
1.0
|
CG
|
A:ASN97
|
3.4
|
28.1
|
1.0
|
C
|
A:TYR99
|
3.5
|
26.9
|
1.0
|
OD2
|
A:ASP95
|
3.6
|
28.6
|
1.0
|
ND2
|
A:ASN97
|
4.1
|
25.9
|
1.0
|
CA
|
A:ASP93
|
4.1
|
26.4
|
1.0
|
N
|
A:TYR99
|
4.1
|
25.2
|
1.0
|
N
|
A:ASN97
|
4.2
|
26.4
|
1.0
|
OD1
|
A:ASP93
|
4.2
|
27.4
|
1.0
|
CB
|
A:ASP93
|
4.2
|
25.9
|
1.0
|
O
|
A:HOH524
|
4.3
|
31.6
|
1.0
|
CG
|
A:GLU104
|
4.3
|
24.9
|
1.0
|
CA
|
A:TYR99
|
4.4
|
25.4
|
1.0
|
C
|
A:ASP93
|
4.4
|
27.6
|
1.0
|
N
|
A:ASP95
|
4.4
|
27.6
|
1.0
|
N
|
A:ILE100
|
4.5
|
26.4
|
1.0
|
CA
|
A:ILE100
|
4.5
|
27.1
|
1.0
|
CB
|
A:ASN97
|
4.5
|
25.7
|
1.0
|
CB
|
A:ASP95
|
4.5
|
28.1
|
1.0
|
N
|
A:SER101
|
4.6
|
25.3
|
1.0
|
N
|
A:LYS94
|
4.7
|
28.0
|
1.0
|
N
|
A:GLY96
|
4.7
|
27.3
|
1.0
|
CA
|
A:ASN97
|
4.7
|
25.6
|
1.0
|
O
|
A:HOH514
|
4.8
|
31.6
|
1.0
|
N
|
A:GLY98
|
4.8
|
25.5
|
1.0
|
CB
|
A:TYR99
|
4.8
|
25.5
|
1.0
|
CA
|
A:ASP95
|
4.8
|
27.9
|
1.0
|
O
|
A:ASP93
|
4.9
|
26.6
|
1.0
|
C
|
A:ASP95
|
4.9
|
28.4
|
1.0
|
O
|
A:HOH519
|
4.9
|
34.9
|
1.0
|
C
|
A:ASN97
|
5.0
|
25.4
|
1.0
|
|
Calcium binding site 4 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 4 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca504
b:20.4
occ:1.00
|
OD2
|
A:ASP129
|
2.3
|
26.3
|
1.0
|
O
|
A:HOH512
|
2.3
|
19.7
|
1.0
|
O
|
A:GLN135
|
2.4
|
26.6
|
1.0
|
OD1
|
A:ASP131
|
2.4
|
27.5
|
1.0
|
OE1
|
A:GLU140
|
2.4
|
25.5
|
1.0
|
OD2
|
A:ASP133
|
2.4
|
24.9
|
1.0
|
OE2
|
A:GLU140
|
2.6
|
23.8
|
1.0
|
CD
|
A:GLU140
|
2.8
|
25.7
|
1.0
|
CG
|
A:ASP131
|
3.3
|
26.9
|
1.0
|
CG
|
A:ASP133
|
3.3
|
27.6
|
1.0
|
CG
|
A:ASP129
|
3.4
|
29.0
|
1.0
|
C
|
A:GLN135
|
3.5
|
25.6
|
1.0
|
OD2
|
A:ASP131
|
3.7
|
29.5
|
1.0
|
OD1
|
A:ASP133
|
3.7
|
29.4
|
1.0
|
CA
|
A:ASP129
|
4.2
|
28.4
|
1.0
|
N
|
A:ASP133
|
4.2
|
26.0
|
1.0
|
N
|
A:ASP131
|
4.2
|
27.9
|
1.0
|
OD1
|
A:ASP129
|
4.2
|
26.1
|
1.0
|
N
|
A:GLN135
|
4.2
|
26.8
|
1.0
|
CB
|
A:ASP129
|
4.3
|
28.8
|
1.0
|
N
|
A:ASN137
|
4.3
|
24.8
|
1.0
|
CG
|
A:GLU140
|
4.4
|
25.1
|
1.0
|
CA
|
A:VAL136
|
4.4
|
23.6
|
1.0
|
N
|
A:VAL136
|
4.4
|
24.1
|
1.0
|
N
|
A:GLY132
|
4.4
|
28.1
|
1.0
|
C
|
A:ASP129
|
4.4
|
27.9
|
1.0
|
CB
|
A:ASP133
|
4.5
|
24.9
|
1.0
|
CA
|
A:GLN135
|
4.5
|
26.2
|
1.0
|
CB
|
A:ASP131
|
4.5
|
27.8
|
1.0
|
N
|
A:ILE130
|
4.6
|
27.5
|
1.0
|
CA
|
A:ASP131
|
4.7
|
27.7
|
1.0
|
CA
|
A:ASP133
|
4.7
|
26.4
|
1.0
|
N
|
A:GLY134
|
4.7
|
26.2
|
1.0
|
C
|
A:ASP131
|
4.8
|
27.5
|
1.0
|
C
|
A:VAL136
|
4.8
|
25.2
|
1.0
|
CG
|
A:ASN137
|
4.9
|
25.2
|
1.0
|
CG
|
A:GLN135
|
4.9
|
25.1
|
0.5
|
O
|
A:ASP129
|
5.0
|
28.6
|
1.0
|
C
|
A:ASP133
|
5.0
|
26.7
|
1.0
|
|
Calcium binding site 5 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 5 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca506
b:45.4
occ:1.00
|
OD1
|
B:ASP20
|
2.3
|
32.5
|
1.0
|
OE2
|
B:GLU31
|
2.3
|
30.1
|
1.0
|
O
|
B:THR26
|
2.4
|
35.4
|
1.0
|
OE1
|
B:GLU31
|
2.4
|
29.7
|
1.0
|
OD1
|
B:ASP22
|
2.5
|
32.2
|
1.0
|
CD
|
B:GLU31
|
2.7
|
31.1
|
1.0
|
OD2
|
B:ASP24
|
2.7
|
34.2
|
1.0
|
CG
|
B:ASP22
|
3.4
|
32.8
|
1.0
|
CG
|
B:ASP24
|
3.5
|
33.6
|
1.0
|
CG
|
B:ASP20
|
3.5
|
32.4
|
1.0
|
C
|
B:THR26
|
3.6
|
34.0
|
1.0
|
OD2
|
B:ASP22
|
3.8
|
34.0
|
1.0
|
OD1
|
B:ASP24
|
3.8
|
35.5
|
1.0
|
CA
|
B:ASP20
|
4.1
|
31.7
|
1.0
|
CG
|
B:GLU31
|
4.2
|
32.5
|
1.0
|
N
|
B:THR26
|
4.3
|
33.8
|
1.0
|
OD2
|
B:ASP20
|
4.3
|
35.1
|
1.0
|
N
|
B:ASP22
|
4.3
|
32.3
|
1.0
|
C
|
B:ASP20
|
4.3
|
31.6
|
1.0
|
CB
|
B:ASP20
|
4.3
|
31.9
|
1.0
|
N
|
B:ASP24
|
4.4
|
33.6
|
1.0
|
N
|
B:LYS21
|
4.5
|
31.4
|
1.0
|
CA
|
B:THR26
|
4.5
|
34.1
|
1.0
|
N
|
B:ILE27
|
4.5
|
34.1
|
1.0
|
CA
|
B:ILE27
|
4.6
|
33.4
|
1.0
|
CB
|
B:ASP24
|
4.6
|
33.9
|
1.0
|
OG1
|
B:THR26
|
4.6
|
35.6
|
1.0
|
CB
|
B:ASP22
|
4.6
|
32.7
|
1.0
|
N
|
B:GLY23
|
4.7
|
32.9
|
1.0
|
CA
|
B:ASP22
|
4.8
|
32.6
|
1.0
|
O
|
B:ASP20
|
4.9
|
31.1
|
1.0
|
CA
|
B:ASP24
|
4.9
|
33.6
|
1.0
|
N
|
B:GLY25
|
4.9
|
33.6
|
1.0
|
O
|
B:HOH533
|
4.9
|
52.8
|
1.0
|
C
|
B:ASP22
|
4.9
|
32.7
|
1.0
|
N
|
B:THR28
|
4.9
|
33.3
|
1.0
|
|
Calcium binding site 6 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 6 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca507
b:51.9
occ:1.00
|
O
|
B:HOH542
|
1.3
|
29.9
|
1.0
|
OD2
|
B:ASP56
|
2.1
|
43.8
|
1.0
|
OE2
|
B:GLU67
|
2.3
|
38.0
|
1.0
|
OD2
|
B:ASP58
|
2.4
|
48.8
|
1.0
|
OE1
|
B:GLU67
|
2.5
|
40.6
|
1.0
|
O
|
B:THR62
|
2.6
|
38.7
|
1.0
|
CD
|
B:GLU67
|
2.7
|
37.5
|
1.0
|
OD1
|
B:ASN60
|
2.8
|
47.6
|
1.0
|
O
|
B:HOH548
|
2.9
|
45.5
|
1.0
|
CG
|
B:ASP56
|
3.2
|
43.1
|
1.0
|
CG
|
B:ASP58
|
3.3
|
46.7
|
1.0
|
CG
|
B:ASN60
|
3.7
|
46.6
|
1.0
|
CB
|
B:ASP56
|
3.8
|
43.5
|
1.0
|
C
|
B:THR62
|
3.8
|
39.5
|
1.0
|
OD1
|
B:ASP58
|
3.8
|
47.7
|
1.0
|
CA
|
B:ASP56
|
3.9
|
43.1
|
1.0
|
C
|
B:ASP56
|
4.1
|
43.7
|
1.0
|
N
|
B:ASP58
|
4.1
|
46.6
|
1.0
|
CG
|
B:GLU67
|
4.2
|
36.2
|
1.0
|
ND2
|
B:ASN60
|
4.2
|
47.5
|
1.0
|
OD1
|
B:ASP56
|
4.3
|
40.9
|
1.0
|
N
|
B:GLY59
|
4.3
|
47.0
|
1.0
|
N
|
B:ALA57
|
4.3
|
44.7
|
1.0
|
N
|
B:ASN60
|
4.3
|
46.5
|
1.0
|
CB
|
B:ASP58
|
4.5
|
46.1
|
1.0
|
CA
|
B:ILE63
|
4.5
|
36.8
|
1.0
|
N
|
B:THR62
|
4.5
|
41.0
|
1.0
|
N
|
B:ASP64
|
4.5
|
35.7
|
1.0
|
N
|
B:ILE63
|
4.6
|
38.3
|
1.0
|
CA
|
B:ASP58
|
4.7
|
46.8
|
1.0
|
O
|
B:ASP56
|
4.7
|
43.6
|
1.0
|
CA
|
B:THR62
|
4.8
|
39.9
|
1.0
|
OG1
|
B:THR62
|
4.8
|
41.0
|
1.0
|
C
|
B:ASP58
|
4.8
|
46.9
|
1.0
|
CB
|
B:ASN60
|
4.8
|
46.1
|
1.0
|
CG
|
B:ASP64
|
4.9
|
37.0
|
1.0
|
OD1
|
B:ASP64
|
4.9
|
37.0
|
1.0
|
O
|
B:HOH523
|
4.9
|
50.0
|
1.0
|
CA
|
B:ASN60
|
5.0
|
45.9
|
1.0
|
|
Calcium binding site 7 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 7 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca508
b:37.6
occ:1.00
|
OD1
|
B:ASP93
|
2.3
|
24.1
|
1.0
|
OE2
|
B:GLU104
|
2.3
|
28.0
|
1.0
|
O
|
B:TYR99
|
2.3
|
26.4
|
1.0
|
OD1
|
B:ASP95
|
2.4
|
32.8
|
1.0
|
OD1
|
B:ASN97
|
2.4
|
25.1
|
1.0
|
OE1
|
B:GLU104
|
2.6
|
25.9
|
1.0
|
CD
|
B:GLU104
|
2.8
|
26.1
|
1.0
|
CG
|
B:ASN97
|
3.4
|
24.6
|
1.0
|
CG
|
B:ASP93
|
3.4
|
25.3
|
1.0
|
CG
|
B:ASP95
|
3.4
|
29.4
|
1.0
|
C
|
B:TYR99
|
3.5
|
26.6
|
1.0
|
OD2
|
B:ASP95
|
3.9
|
31.3
|
1.0
|
ND2
|
B:ASN97
|
4.0
|
22.7
|
1.0
|
CA
|
B:ASP93
|
4.2
|
25.8
|
1.0
|
N
|
B:ASN97
|
4.2
|
23.9
|
1.0
|
OD2
|
B:ASP93
|
4.2
|
27.9
|
1.0
|
N
|
B:TYR99
|
4.2
|
26.1
|
1.0
|
CB
|
B:ASP93
|
4.3
|
25.3
|
1.0
|
CG
|
B:GLU104
|
4.3
|
26.1
|
1.0
|
N
|
B:ASP95
|
4.3
|
26.6
|
1.0
|
C
|
B:ASP93
|
4.4
|
26.4
|
1.0
|
CA
|
B:TYR99
|
4.4
|
26.6
|
1.0
|
N
|
B:ILE100
|
4.4
|
26.8
|
1.0
|
CA
|
B:ILE100
|
4.4
|
26.6
|
1.0
|
CB
|
B:ASN97
|
4.5
|
24.7
|
1.0
|
N
|
B:GLY96
|
4.6
|
24.5
|
1.0
|
N
|
B:LYS94
|
4.6
|
26.7
|
1.0
|
NE2
|
B:GLN135
|
4.6
|
28.7
|
1.0
|
CB
|
B:ASP95
|
4.6
|
27.4
|
1.0
|
N
|
B:SER101
|
4.7
|
26.6
|
1.0
|
CA
|
B:ASN97
|
4.8
|
24.7
|
1.0
|
CA
|
B:ASP95
|
4.8
|
26.7
|
1.0
|
O
|
B:ASP93
|
4.8
|
25.3
|
1.0
|
N
|
B:GLY98
|
4.8
|
25.3
|
1.0
|
CB
|
B:TYR99
|
4.9
|
26.4
|
1.0
|
C
|
B:ASP95
|
4.9
|
25.6
|
1.0
|
|
Calcium binding site 8 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 8 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca509
b:43.6
occ:1.00
|
OD2
|
B:ASP129
|
2.3
|
31.9
|
1.0
|
O
|
B:HOH511
|
2.3
|
39.3
|
1.0
|
O
|
B:GLN135
|
2.4
|
27.9
|
1.0
|
OE1
|
B:GLU140
|
2.4
|
28.0
|
1.0
|
OD2
|
B:ASP133
|
2.4
|
29.3
|
1.0
|
OD1
|
B:ASP131
|
2.5
|
32.5
|
1.0
|
OE2
|
B:GLU140
|
2.6
|
25.4
|
1.0
|
CD
|
B:GLU140
|
2.9
|
26.9
|
1.0
|
CG
|
B:ASP131
|
3.3
|
31.2
|
1.0
|
CG
|
B:ASP129
|
3.4
|
32.0
|
1.0
|
CG
|
B:ASP133
|
3.4
|
30.0
|
1.0
|
C
|
B:GLN135
|
3.6
|
28.0
|
1.0
|
OD2
|
B:ASP131
|
3.6
|
30.0
|
1.0
|
OD1
|
B:ASP133
|
3.8
|
28.6
|
1.0
|
CA
|
B:ASP129
|
4.0
|
32.2
|
1.0
|
CB
|
B:ASP129
|
4.0
|
32.2
|
1.0
|
N
|
B:ILE130
|
4.2
|
31.6
|
1.0
|
N
|
B:ASP131
|
4.2
|
31.3
|
1.0
|
N
|
B:ASN137
|
4.3
|
27.1
|
1.0
|
CA
|
B:VAL136
|
4.3
|
27.3
|
1.0
|
OD1
|
B:ASP129
|
4.3
|
32.1
|
1.0
|
C
|
B:ASP129
|
4.3
|
32.0
|
1.0
|
N
|
B:ASP133
|
4.3
|
28.8
|
1.0
|
N
|
B:GLN135
|
4.3
|
27.7
|
1.0
|
N
|
B:VAL136
|
4.4
|
27.8
|
1.0
|
CG
|
B:GLU140
|
4.4
|
27.2
|
1.0
|
N
|
B:GLY132
|
4.5
|
30.9
|
1.0
|
CA
|
B:GLN135
|
4.5
|
27.9
|
1.0
|
CB
|
B:ASP131
|
4.6
|
30.9
|
1.0
|
CB
|
B:ASP133
|
4.6
|
29.2
|
1.0
|
CG
|
B:ASN137
|
4.7
|
28.5
|
1.0
|
CA
|
B:ASP131
|
4.8
|
31.2
|
1.0
|
C
|
B:VAL136
|
4.8
|
27.4
|
1.0
|
ND2
|
B:ASN137
|
4.8
|
29.3
|
1.0
|
CA
|
B:ASP133
|
4.9
|
28.9
|
1.0
|
N
|
B:GLY134
|
4.9
|
27.7
|
1.0
|
C
|
B:ASP131
|
4.9
|
31.1
|
1.0
|
OD1
|
B:ASN137
|
4.9
|
30.6
|
1.0
|
|
Calcium binding site 9 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 9 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca511
b:42.5
occ:1.00
|
OD1
|
C:ASP20
|
2.2
|
31.1
|
1.0
|
OD2
|
C:ASP24
|
2.3
|
30.1
|
1.0
|
O
|
C:THR26
|
2.3
|
28.1
|
1.0
|
OD1
|
C:ASP22
|
2.4
|
32.5
|
1.0
|
OE1
|
C:GLU31
|
2.5
|
27.3
|
1.0
|
O
|
C:HOH520
|
2.6
|
44.4
|
1.0
|
OE2
|
C:GLU31
|
2.6
|
25.7
|
1.0
|
CD
|
C:GLU31
|
2.9
|
26.1
|
1.0
|
CG
|
C:ASP24
|
3.3
|
30.5
|
1.0
|
CG
|
C:ASP20
|
3.3
|
29.4
|
1.0
|
CG
|
C:ASP22
|
3.4
|
33.0
|
1.0
|
C
|
C:THR26
|
3.6
|
27.8
|
1.0
|
OD2
|
C:ASP22
|
3.7
|
34.1
|
1.0
|
OD1
|
C:ASP24
|
3.9
|
30.8
|
1.0
|
OG1
|
C:THR26
|
4.0
|
31.4
|
1.0
|
CA
|
C:ASP20
|
4.1
|
28.2
|
1.0
|
CB
|
C:ASP20
|
4.1
|
27.8
|
1.0
|
N
|
C:THR26
|
4.1
|
28.3
|
1.0
|
OD2
|
C:ASP20
|
4.2
|
26.5
|
1.0
|
N
|
C:ASP24
|
4.3
|
30.6
|
1.0
|
CB
|
C:ASP24
|
4.3
|
30.4
|
1.0
|
CG
|
C:GLU31
|
4.3
|
24.8
|
1.0
|
CA
|
C:THR26
|
4.4
|
28.6
|
1.0
|
C
|
C:ASP20
|
4.5
|
29.1
|
1.0
|
N
|
C:ILE27
|
4.5
|
26.4
|
1.0
|
CA
|
C:ILE27
|
4.6
|
24.9
|
1.0
|
N
|
C:ASP22
|
4.6
|
31.6
|
1.0
|
CB
|
C:ASP22
|
4.7
|
32.0
|
1.0
|
CA
|
C:ASP24
|
4.7
|
30.5
|
1.0
|
N
|
C:GLY25
|
4.7
|
29.4
|
1.0
|
CG2
|
C:THR28
|
4.8
|
23.6
|
1.0
|
N
|
C:LYS21
|
4.8
|
30.2
|
1.0
|
N
|
C:GLY23
|
4.8
|
31.5
|
1.0
|
CB
|
C:THR26
|
4.9
|
29.2
|
1.0
|
C
|
C:ASP24
|
4.9
|
30.3
|
1.0
|
O
|
C:HOH575
|
5.0
|
47.0
|
1.0
|
CA
|
C:ASP22
|
5.0
|
32.0
|
1.0
|
N
|
C:THR28
|
5.0
|
25.6
|
1.0
|
|
Calcium binding site 10 out
of 12 in 2be6
Go back to
Calcium Binding Sites List in 2be6
Calcium binding site 10 out
of 12 in the 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 10 of 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca512
b:32.7
occ:1.00
|
O
|
C:HOH607
|
1.8
|
51.4
|
1.0
|
OD1
|
C:ASN60
|
2.3
|
30.6
|
1.0
|
OE1
|
C:GLU67
|
2.3
|
22.1
|
1.0
|
O
|
C:THR62
|
2.4
|
27.1
|
1.0
|
OD1
|
C:ASP56
|
2.5
|
26.2
|
1.0
|
OE2
|
C:GLU67
|
2.5
|
24.0
|
1.0
|
OD1
|
C:ASP58
|
2.5
|
33.4
|
1.0
|
O
|
C:HOH527
|
2.6
|
40.1
|
1.0
|
CD
|
C:GLU67
|
2.8
|
26.0
|
1.0
|
CG
|
C:ASN60
|
3.2
|
30.3
|
1.0
|
CG
|
C:ASP58
|
3.5
|
32.5
|
1.0
|
CG
|
C:ASP56
|
3.6
|
27.5
|
1.0
|
C
|
C:THR62
|
3.6
|
26.6
|
1.0
|
ND2
|
C:ASN60
|
3.7
|
29.8
|
1.0
|
OD2
|
C:ASP58
|
4.0
|
33.5
|
1.0
|
O
|
C:HOH593
|
4.0
|
56.6
|
1.0
|
N
|
C:ASN60
|
4.3
|
28.6
|
1.0
|
N
|
C:THR62
|
4.3
|
25.3
|
1.0
|
CG
|
C:GLU67
|
4.3
|
23.7
|
1.0
|
OD2
|
C:ASP56
|
4.3
|
25.9
|
1.0
|
CA
|
C:ASP56
|
4.3
|
29.0
|
1.0
|
CA
|
C:ILE63
|
4.3
|
25.1
|
1.0
|
CB
|
C:ASN60
|
4.4
|
28.0
|
1.0
|
N
|
C:ILE63
|
4.4
|
26.8
|
1.0
|
CB
|
C:ASP56
|
4.4
|
28.5
|
1.0
|
N
|
C:ASP58
|
4.4
|
29.3
|
1.0
|
N
|
C:ASP64
|
4.4
|
25.0
|
1.0
|
CA
|
C:THR62
|
4.5
|
26.4
|
1.0
|
OG1
|
C:THR62
|
4.6
|
25.9
|
1.0
|
N
|
C:GLY59
|
4.6
|
29.5
|
1.0
|
C
|
C:ASP56
|
4.6
|
29.6
|
1.0
|
N
|
C:ALA57
|
4.7
|
29.5
|
1.0
|
O
|
C:HOH620
|
4.7
|
70.8
|
1.0
|
CA
|
C:ASN60
|
4.7
|
28.6
|
1.0
|
N
|
C:GLY61
|
4.7
|
27.6
|
1.0
|
CB
|
C:ASP58
|
4.7
|
30.4
|
1.0
|
C
|
C:ILE63
|
4.8
|
25.7
|
1.0
|
OD1
|
C:ASP64
|
4.8
|
29.6
|
1.0
|
CG
|
C:ASP64
|
4.9
|
28.8
|
1.0
|
CA
|
C:ASP58
|
4.9
|
30.4
|
1.0
|
C
|
C:ASP58
|
4.9
|
30.0
|
1.0
|
C
|
C:ASN60
|
5.0
|
28.6
|
1.0
|
|
Reference:
F.Van Petegem,
F.C.Chatelain,
D.L.Minor Jr..
Insights Into Voltage-Gated Calcium Channel Regulation From the Structure of the Ca(V)1.2 Iq Domain-Ca(2+)/Calmodulin Complex Nat.Struct.Mol.Biol. V. 12 1108 2005.
ISSN: ISSN 1545-9993
PubMed: 16299511
DOI: 10.1038/NSMB1027
Page generated: Fri Jul 12 09:02:02 2024
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