Calcium in PDB 2l7l: Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
Enzymatic activity of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
All present enzymatic activity of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I:
2.7.11.17;
Calcium Binding Sites:
The binding sites of Calcium atom in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
(pdb code 2l7l). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I, PDB code: 2l7l:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 2l7l
Go back to
Calcium Binding Sites List in 2l7l
Calcium binding site 1 out
of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca401
b:0.0
occ:1.00
|
OD1
|
A:ASP22
|
2.6
|
0.0
|
1.0
|
OE1
|
A:GLU31
|
2.6
|
0.0
|
1.0
|
O
|
A:THR26
|
2.6
|
0.0
|
1.0
|
OE2
|
A:GLU31
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP24
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP20
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP22
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP24
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP22
|
2.9
|
0.0
|
1.0
|
CD
|
A:GLU31
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP24
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP20
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP20
|
3.2
|
0.0
|
1.0
|
HA
|
A:ILE27
|
3.5
|
0.0
|
1.0
|
HA
|
A:ASP20
|
3.5
|
0.0
|
1.0
|
H
|
A:ASP24
|
3.6
|
0.0
|
1.0
|
C
|
A:THR26
|
3.8
|
0.0
|
1.0
|
H
|
A:ASP22
|
3.8
|
0.0
|
1.0
|
HG21
|
A:THR28
|
3.8
|
0.0
|
1.0
|
HG1
|
A:THR26
|
3.9
|
0.0
|
1.0
|
H
|
A:THR26
|
4.0
|
0.0
|
1.0
|
H
|
A:THR28
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP20
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP24
|
4.3
|
0.0
|
1.0
|
CA
|
A:ASP20
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP22
|
4.3
|
0.0
|
1.0
|
CG
|
A:GLU31
|
4.4
|
0.0
|
1.0
|
CA
|
A:ILE27
|
4.4
|
0.0
|
1.0
|
HB3
|
A:ASP24
|
4.4
|
0.0
|
1.0
|
N
|
A:ASP24
|
4.5
|
0.0
|
1.0
|
H
|
A:GLY23
|
4.5
|
0.0
|
1.0
|
N
|
A:ILE27
|
4.6
|
0.0
|
1.0
|
H
|
A:LYS21
|
4.6
|
0.0
|
1.0
|
N
|
A:ASP22
|
4.6
|
0.0
|
1.0
|
OG1
|
A:THR26
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP22
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU31
|
4.7
|
0.0
|
1.0
|
HG12
|
A:ILE27
|
4.7
|
0.0
|
1.0
|
HB2
|
A:ASP20
|
4.7
|
0.0
|
1.0
|
N
|
A:THR26
|
4.7
|
0.0
|
1.0
|
C
|
A:ASP20
|
4.8
|
0.0
|
1.0
|
CA
|
A:THR26
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY23
|
4.9
|
0.0
|
1.0
|
CG2
|
A:THR28
|
4.9
|
0.0
|
1.0
|
HG13
|
A:ILE27
|
4.9
|
0.0
|
1.0
|
N
|
A:LYS21
|
4.9
|
0.0
|
1.0
|
HB3
|
A:GLU31
|
4.9
|
0.0
|
1.0
|
H
|
A:GLY25
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASP22
|
4.9
|
0.0
|
1.0
|
N
|
A:THR28
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASP24
|
5.0
|
0.0
|
1.0
|
HG3
|
A:GLU31
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 4 in 2l7l
Go back to
Calcium Binding Sites List in 2l7l
Calcium binding site 2 out
of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca402
b:0.0
occ:1.00
|
O
|
A:THR62
|
2.6
|
0.0
|
1.0
|
OE2
|
A:GLU67
|
2.6
|
0.0
|
1.0
|
OE1
|
A:GLU67
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASN60
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP58
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP58
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP56
|
2.7
|
0.0
|
1.0
|
OD2
|
A:ASP56
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP56
|
2.8
|
0.0
|
1.0
|
HD22
|
A:ASN60
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP58
|
2.9
|
0.0
|
1.0
|
HA
|
A:ASP56
|
2.9
|
0.0
|
1.0
|
CD
|
A:GLU67
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASN60
|
3.1
|
0.0
|
1.0
|
ND2
|
A:ASN60
|
3.2
|
0.0
|
1.0
|
H
|
A:ASP58
|
3.3
|
0.0
|
1.0
|
H
|
A:ASN60
|
3.3
|
0.0
|
1.0
|
HA
|
A:ILE63
|
3.4
|
0.0
|
1.0
|
CA
|
A:ASP56
|
3.7
|
0.0
|
1.0
|
C
|
A:THR62
|
3.8
|
0.0
|
1.0
|
CB
|
A:ASP56
|
3.8
|
0.0
|
1.0
|
H
|
A:THR62
|
3.9
|
0.0
|
1.0
|
HD21
|
A:ASN60
|
3.9
|
0.0
|
1.0
|
H
|
A:GLY59
|
4.0
|
0.0
|
1.0
|
H
|
A:ALA57
|
4.1
|
0.0
|
1.0
|
HG22
|
A:ILE63
|
4.1
|
0.0
|
1.0
|
N
|
A:ASP58
|
4.2
|
0.0
|
1.0
|
HG1
|
A:THR62
|
4.2
|
0.0
|
1.0
|
N
|
A:ASN60
|
4.2
|
0.0
|
1.0
|
C
|
A:ASP56
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASN60
|
4.2
|
0.0
|
1.0
|
HG23
|
A:ILE63
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASN60
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP58
|
4.3
|
0.0
|
1.0
|
N
|
A:ALA57
|
4.3
|
0.0
|
1.0
|
CA
|
A:ILE63
|
4.4
|
0.0
|
1.0
|
CG
|
A:GLU67
|
4.4
|
0.0
|
1.0
|
N
|
A:GLY59
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ASP56
|
4.4
|
0.0
|
1.0
|
H
|
A:ASP64
|
4.4
|
0.0
|
1.0
|
H
|
A:GLY61
|
4.5
|
0.0
|
1.0
|
N
|
A:ILE63
|
4.5
|
0.0
|
1.0
|
N
|
A:THR62
|
4.6
|
0.0
|
1.0
|
HB3
|
A:ASP56
|
4.6
|
0.0
|
1.0
|
CG2
|
A:ILE63
|
4.6
|
0.0
|
1.0
|
CA
|
A:ASP58
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP58
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASN60
|
4.8
|
0.0
|
1.0
|
HG2
|
A:GLU67
|
4.8
|
0.0
|
1.0
|
CA
|
A:THR62
|
4.8
|
0.0
|
1.0
|
C
|
A:ASP58
|
4.8
|
0.0
|
1.0
|
HG3
|
A:GLU67
|
4.9
|
0.0
|
1.0
|
N
|
A:ASP56
|
4.9
|
0.0
|
1.0
|
HB3
|
A:GLU67
|
5.0
|
0.0
|
1.0
|
O
|
A:ASP56
|
5.0
|
0.0
|
1.0
|
HB2
|
A:ASP58
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 3 out
of 4 in 2l7l
Go back to
Calcium Binding Sites List in 2l7l
Calcium binding site 3 out
of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca403
b:0.0
occ:1.00
|
HD22
|
A:ASN97
|
2.3
|
0.0
|
1.0
|
O
|
A:TYR99
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP95
|
2.6
|
0.0
|
1.0
|
OE1
|
A:GLU104
|
2.6
|
0.0
|
1.0
|
OE2
|
A:GLU104
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASN97
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP95
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP93
|
2.7
|
0.0
|
1.0
|
ND2
|
A:ASN97
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASP95
|
2.9
|
0.0
|
1.0
|
CD
|
A:GLU104
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASN97
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP93
|
3.0
|
0.0
|
1.0
|
HA
|
A:ASP93
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP93
|
3.2
|
0.0
|
1.0
|
H
|
A:ASN97
|
3.5
|
0.0
|
1.0
|
HA
|
A:ILE100
|
3.5
|
0.0
|
1.0
|
HD21
|
A:ASN97
|
3.5
|
0.0
|
1.0
|
H
|
A:ASP95
|
3.7
|
0.0
|
1.0
|
C
|
A:TYR99
|
3.8
|
0.0
|
1.0
|
H
|
A:SER101
|
3.8
|
0.0
|
1.0
|
CA
|
A:ASP93
|
4.0
|
0.0
|
1.0
|
H
|
A:TYR99
|
4.0
|
0.0
|
1.0
|
CB
|
A:ASP93
|
4.1
|
0.0
|
1.0
|
H
|
A:GLY96
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASN97
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP95
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASN97
|
4.4
|
0.0
|
1.0
|
CG
|
A:GLU104
|
4.4
|
0.0
|
1.0
|
N
|
A:ASN97
|
4.4
|
0.0
|
1.0
|
H
|
A:LYS94
|
4.4
|
0.0
|
1.0
|
CA
|
A:ILE100
|
4.4
|
0.0
|
1.0
|
N
|
A:ASP95
|
4.5
|
0.0
|
1.0
|
C
|
A:ASP93
|
4.5
|
0.0
|
1.0
|
HB3
|
A:ASP95
|
4.5
|
0.0
|
1.0
|
N
|
A:ILE100
|
4.5
|
0.0
|
1.0
|
HB3
|
A:SER101
|
4.6
|
0.0
|
1.0
|
N
|
A:SER101
|
4.6
|
0.0
|
1.0
|
H
|
A:GLY98
|
4.6
|
0.0
|
1.0
|
HB2
|
A:ASP93
|
4.6
|
0.0
|
1.0
|
N
|
A:LYS94
|
4.6
|
0.0
|
1.0
|
N
|
A:TYR99
|
4.7
|
0.0
|
1.0
|
HG3
|
A:GLU104
|
4.7
|
0.0
|
1.0
|
N
|
A:GLY96
|
4.7
|
0.0
|
1.0
|
HB2
|
A:TYR99
|
4.8
|
0.0
|
1.0
|
CA
|
A:TYR99
|
4.8
|
0.0
|
1.0
|
HB2
|
A:GLU104
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASP95
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASN97
|
4.9
|
0.0
|
1.0
|
HB3
|
A:ASP93
|
4.9
|
0.0
|
1.0
|
O
|
A:PHE92
|
5.0
|
0.0
|
1.0
|
HB2
|
A:ASP95
|
5.0
|
0.0
|
1.0
|
HG2
|
A:GLU104
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 4 out
of 4 in 2l7l
Go back to
Calcium Binding Sites List in 2l7l
Calcium binding site 4 out
of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca404
b:0.0
occ:1.00
|
OD1
|
A:ASP129
|
2.6
|
0.0
|
1.0
|
O
|
A:GLN135
|
2.6
|
0.0
|
1.0
|
OE2
|
A:GLU140
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP133
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP131
|
2.6
|
0.0
|
1.0
|
OE1
|
A:GLU140
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP133
|
2.8
|
0.0
|
1.0
|
CD
|
A:GLU140
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP133
|
2.9
|
0.0
|
1.0
|
OD1
|
A:ASP131
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASP129
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASP131
|
3.3
|
0.0
|
1.0
|
H
|
A:ASN137
|
3.4
|
0.0
|
1.0
|
OD2
|
A:ASP129
|
3.5
|
0.0
|
1.0
|
HA
|
A:VAL136
|
3.5
|
0.0
|
1.0
|
C
|
A:GLN135
|
3.5
|
0.0
|
1.0
|
HB2
|
A:ASN137
|
3.7
|
0.0
|
1.0
|
HB2
|
A:GLN135
|
3.8
|
0.0
|
1.0
|
H
|
A:ASP133
|
3.9
|
0.0
|
1.0
|
HD2
|
A:TYR99
|
3.9
|
0.0
|
1.0
|
H
|
A:GLN135
|
3.9
|
0.0
|
1.0
|
N
|
A:ASN137
|
4.0
|
0.0
|
1.0
|
CA
|
A:VAL136
|
4.1
|
0.0
|
1.0
|
N
|
A:VAL136
|
4.1
|
0.0
|
1.0
|
CB
|
A:ASP133
|
4.2
|
0.0
|
1.0
|
HB3
|
A:ASP133
|
4.2
|
0.0
|
1.0
|
HE2
|
A:TYR99
|
4.2
|
0.0
|
1.0
|
CG
|
A:GLU140
|
4.3
|
0.0
|
1.0
|
HA
|
A:ASP129
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASN137
|
4.4
|
0.0
|
1.0
|
CA
|
A:GLN135
|
4.4
|
0.0
|
1.0
|
C
|
A:VAL136
|
4.4
|
0.0
|
1.0
|
HG3
|
A:GLU140
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASN137
|
4.5
|
0.0
|
1.0
|
H
|
A:ASP131
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP129
|
4.5
|
0.0
|
1.0
|
CB
|
A:GLN135
|
4.5
|
0.0
|
1.0
|
N
|
A:GLN135
|
4.5
|
0.0
|
1.0
|
HB2
|
A:ASP129
|
4.6
|
0.0
|
1.0
|
HB2
|
A:GLU140
|
4.7
|
0.0
|
1.0
|
H
|
A:GLY132
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP133
|
4.7
|
0.0
|
1.0
|
CB
|
A:ASP131
|
4.8
|
0.0
|
1.0
|
CD2
|
A:TYR99
|
4.8
|
0.0
|
1.0
|
HB3
|
A:GLN135
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASN137
|
4.9
|
0.0
|
1.0
|
CE2
|
A:TYR99
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP133
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASP129
|
5.0
|
0.0
|
1.0
|
HG2
|
A:GLU140
|
5.0
|
0.0
|
1.0
|
H
|
A:VAL136
|
5.0
|
0.0
|
1.0
|
CB
|
A:GLU140
|
5.0
|
0.0
|
1.0
|
CA
|
A:ASP133
|
5.0
|
0.0
|
1.0
|
|
Reference:
J.L.Gifford,
H.Ishida,
H.J.Vogel.
Fast Methionine-Based Solution Structure Determination of Calcium-Calmodulin Complexes. J.Biomol.uc(Nmr) V. 50 71 2011.
ISSN: ISSN 0925-2738
PubMed: 21360154
DOI: 10.1007/S10858-011-9495-3
Page generated: Fri Jul 12 14:04:33 2024
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