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Calcium in PDB 2l7l: Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I

Enzymatic activity of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I

All present enzymatic activity of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I:
2.7.11.17;

Calcium Binding Sites:

The binding sites of Calcium atom in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I (pdb code 2l7l). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I, PDB code: 2l7l:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 2l7l

Go back to Calcium Binding Sites List in 2l7l
Calcium binding site 1 out of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:0.0
occ:1.00
OD1 A:ASP22 2.6 0.0 1.0
OE1 A:GLU31 2.6 0.0 1.0
O A:THR26 2.6 0.0 1.0
OE2 A:GLU31 2.6 0.0 1.0
OD2 A:ASP24 2.6 0.0 1.0
OD2 A:ASP20 2.6 0.0 1.0
OD2 A:ASP22 2.6 0.0 1.0
OD1 A:ASP24 2.8 0.0 1.0
CG A:ASP22 2.9 0.0 1.0
CD A:GLU31 2.9 0.0 1.0
CG A:ASP24 2.9 0.0 1.0
CG A:ASP20 3.1 0.0 1.0
OD1 A:ASP20 3.2 0.0 1.0
HA A:ILE27 3.5 0.0 1.0
HA A:ASP20 3.5 0.0 1.0
H A:ASP24 3.6 0.0 1.0
C A:THR26 3.8 0.0 1.0
H A:ASP22 3.8 0.0 1.0
HG21 A:THR28 3.8 0.0 1.0
HG1 A:THR26 3.9 0.0 1.0
H A:THR26 4.0 0.0 1.0
H A:THR28 4.2 0.0 1.0
CB A:ASP20 4.3 0.0 1.0
CB A:ASP24 4.3 0.0 1.0
CA A:ASP20 4.3 0.0 1.0
CB A:ASP22 4.3 0.0 1.0
CG A:GLU31 4.4 0.0 1.0
CA A:ILE27 4.4 0.0 1.0
HB3 A:ASP24 4.4 0.0 1.0
N A:ASP24 4.5 0.0 1.0
H A:GLY23 4.5 0.0 1.0
N A:ILE27 4.6 0.0 1.0
H A:LYS21 4.6 0.0 1.0
N A:ASP22 4.6 0.0 1.0
OG1 A:THR26 4.7 0.0 1.0
HB3 A:ASP22 4.7 0.0 1.0
HG2 A:GLU31 4.7 0.0 1.0
HG12 A:ILE27 4.7 0.0 1.0
HB2 A:ASP20 4.7 0.0 1.0
N A:THR26 4.7 0.0 1.0
C A:ASP20 4.8 0.0 1.0
CA A:THR26 4.8 0.0 1.0
N A:GLY23 4.9 0.0 1.0
CG2 A:THR28 4.9 0.0 1.0
HG13 A:ILE27 4.9 0.0 1.0
N A:LYS21 4.9 0.0 1.0
HB3 A:GLU31 4.9 0.0 1.0
H A:GLY25 4.9 0.0 1.0
CA A:ASP22 4.9 0.0 1.0
N A:THR28 4.9 0.0 1.0
CA A:ASP24 5.0 0.0 1.0
HG3 A:GLU31 5.0 0.0 1.0

Calcium binding site 2 out of 4 in 2l7l

Go back to Calcium Binding Sites List in 2l7l
Calcium binding site 2 out of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:0.0
occ:1.00
O A:THR62 2.6 0.0 1.0
OE2 A:GLU67 2.6 0.0 1.0
OE1 A:GLU67 2.6 0.0 1.0
OD1 A:ASN60 2.6 0.0 1.0
OD1 A:ASP58 2.6 0.0 1.0
OD2 A:ASP58 2.6 0.0 1.0
OD1 A:ASP56 2.7 0.0 1.0
OD2 A:ASP56 2.8 0.0 1.0
CG A:ASP56 2.8 0.0 1.0
HD22 A:ASN60 2.9 0.0 1.0
CG A:ASP58 2.9 0.0 1.0
HA A:ASP56 2.9 0.0 1.0
CD A:GLU67 2.9 0.0 1.0
CG A:ASN60 3.1 0.0 1.0
ND2 A:ASN60 3.2 0.0 1.0
H A:ASP58 3.3 0.0 1.0
H A:ASN60 3.3 0.0 1.0
HA A:ILE63 3.4 0.0 1.0
CA A:ASP56 3.7 0.0 1.0
C A:THR62 3.8 0.0 1.0
CB A:ASP56 3.8 0.0 1.0
H A:THR62 3.9 0.0 1.0
HD21 A:ASN60 3.9 0.0 1.0
H A:GLY59 4.0 0.0 1.0
H A:ALA57 4.1 0.0 1.0
HG22 A:ILE63 4.1 0.0 1.0
N A:ASP58 4.2 0.0 1.0
HG1 A:THR62 4.2 0.0 1.0
N A:ASN60 4.2 0.0 1.0
C A:ASP56 4.2 0.0 1.0
CB A:ASN60 4.2 0.0 1.0
HG23 A:ILE63 4.3 0.0 1.0
HB3 A:ASN60 4.3 0.0 1.0
CB A:ASP58 4.3 0.0 1.0
N A:ALA57 4.3 0.0 1.0
CA A:ILE63 4.4 0.0 1.0
CG A:GLU67 4.4 0.0 1.0
N A:GLY59 4.4 0.0 1.0
HB2 A:ASP56 4.4 0.0 1.0
H A:ASP64 4.4 0.0 1.0
H A:GLY61 4.5 0.0 1.0
N A:ILE63 4.5 0.0 1.0
N A:THR62 4.6 0.0 1.0
HB3 A:ASP56 4.6 0.0 1.0
CG2 A:ILE63 4.6 0.0 1.0
CA A:ASP58 4.7 0.0 1.0
HB3 A:ASP58 4.7 0.0 1.0
CA A:ASN60 4.8 0.0 1.0
HG2 A:GLU67 4.8 0.0 1.0
CA A:THR62 4.8 0.0 1.0
C A:ASP58 4.8 0.0 1.0
HG3 A:GLU67 4.9 0.0 1.0
N A:ASP56 4.9 0.0 1.0
HB3 A:GLU67 5.0 0.0 1.0
O A:ASP56 5.0 0.0 1.0
HB2 A:ASP58 5.0 0.0 1.0

Calcium binding site 3 out of 4 in 2l7l

Go back to Calcium Binding Sites List in 2l7l
Calcium binding site 3 out of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:0.0
occ:1.00
HD22 A:ASN97 2.3 0.0 1.0
O A:TYR99 2.5 0.0 1.0
OD1 A:ASP95 2.6 0.0 1.0
OE1 A:GLU104 2.6 0.0 1.0
OE2 A:GLU104 2.6 0.0 1.0
OD1 A:ASN97 2.6 0.0 1.0
OD2 A:ASP95 2.6 0.0 1.0
OD2 A:ASP93 2.7 0.0 1.0
ND2 A:ASN97 2.7 0.0 1.0
CG A:ASP95 2.9 0.0 1.0
CD A:GLU104 2.9 0.0 1.0
CG A:ASN97 2.9 0.0 1.0
CG A:ASP93 3.0 0.0 1.0
HA A:ASP93 3.1 0.0 1.0
OD1 A:ASP93 3.2 0.0 1.0
H A:ASN97 3.5 0.0 1.0
HA A:ILE100 3.5 0.0 1.0
HD21 A:ASN97 3.5 0.0 1.0
H A:ASP95 3.7 0.0 1.0
C A:TYR99 3.8 0.0 1.0
H A:SER101 3.8 0.0 1.0
CA A:ASP93 4.0 0.0 1.0
H A:TYR99 4.0 0.0 1.0
CB A:ASP93 4.1 0.0 1.0
H A:GLY96 4.2 0.0 1.0
CB A:ASN97 4.2 0.0 1.0
CB A:ASP95 4.3 0.0 1.0
HB3 A:ASN97 4.4 0.0 1.0
CG A:GLU104 4.4 0.0 1.0
N A:ASN97 4.4 0.0 1.0
H A:LYS94 4.4 0.0 1.0
CA A:ILE100 4.4 0.0 1.0
N A:ASP95 4.5 0.0 1.0
C A:ASP93 4.5 0.0 1.0
HB3 A:ASP95 4.5 0.0 1.0
N A:ILE100 4.5 0.0 1.0
HB3 A:SER101 4.6 0.0 1.0
N A:SER101 4.6 0.0 1.0
H A:GLY98 4.6 0.0 1.0
HB2 A:ASP93 4.6 0.0 1.0
N A:LYS94 4.6 0.0 1.0
N A:TYR99 4.7 0.0 1.0
HG3 A:GLU104 4.7 0.0 1.0
N A:GLY96 4.7 0.0 1.0
HB2 A:TYR99 4.8 0.0 1.0
CA A:TYR99 4.8 0.0 1.0
HB2 A:GLU104 4.8 0.0 1.0
CA A:ASP95 4.9 0.0 1.0
CA A:ASN97 4.9 0.0 1.0
HB3 A:ASP93 4.9 0.0 1.0
O A:PHE92 5.0 0.0 1.0
HB2 A:ASP95 5.0 0.0 1.0
HG2 A:GLU104 5.0 0.0 1.0

Calcium binding site 4 out of 4 in 2l7l

Go back to Calcium Binding Sites List in 2l7l
Calcium binding site 4 out of 4 in the Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Solution Structure of CA2+/Calmodulin Complexed with A Peptide Representing the Calmodulin-Binding Domain of Calmodulin Kinase I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca404

b:0.0
occ:1.00
OD1 A:ASP129 2.6 0.0 1.0
O A:GLN135 2.6 0.0 1.0
OE2 A:GLU140 2.6 0.0 1.0
OD2 A:ASP133 2.6 0.0 1.0
OD2 A:ASP131 2.6 0.0 1.0
OE1 A:GLU140 2.6 0.0 1.0
OD1 A:ASP133 2.8 0.0 1.0
CD A:GLU140 2.9 0.0 1.0
CG A:ASP133 2.9 0.0 1.0
OD1 A:ASP131 3.2 0.0 1.0
CG A:ASP129 3.3 0.0 1.0
CG A:ASP131 3.3 0.0 1.0
H A:ASN137 3.4 0.0 1.0
OD2 A:ASP129 3.5 0.0 1.0
HA A:VAL136 3.5 0.0 1.0
C A:GLN135 3.5 0.0 1.0
HB2 A:ASN137 3.7 0.0 1.0
HB2 A:GLN135 3.8 0.0 1.0
H A:ASP133 3.9 0.0 1.0
HD2 A:TYR99 3.9 0.0 1.0
H A:GLN135 3.9 0.0 1.0
N A:ASN137 4.0 0.0 1.0
CA A:VAL136 4.1 0.0 1.0
N A:VAL136 4.1 0.0 1.0
CB A:ASP133 4.2 0.0 1.0
HB3 A:ASP133 4.2 0.0 1.0
HE2 A:TYR99 4.2 0.0 1.0
CG A:GLU140 4.3 0.0 1.0
HA A:ASP129 4.3 0.0 1.0
HB3 A:ASN137 4.4 0.0 1.0
CA A:GLN135 4.4 0.0 1.0
C A:VAL136 4.4 0.0 1.0
HG3 A:GLU140 4.4 0.0 1.0
CB A:ASN137 4.5 0.0 1.0
H A:ASP131 4.5 0.0 1.0
CB A:ASP129 4.5 0.0 1.0
CB A:GLN135 4.5 0.0 1.0
N A:GLN135 4.5 0.0 1.0
HB2 A:ASP129 4.6 0.0 1.0
HB2 A:GLU140 4.7 0.0 1.0
H A:GLY132 4.7 0.0 1.0
N A:ASP133 4.7 0.0 1.0
CB A:ASP131 4.8 0.0 1.0
CD2 A:TYR99 4.8 0.0 1.0
HB3 A:GLN135 4.8 0.0 1.0
CA A:ASN137 4.9 0.0 1.0
CE2 A:TYR99 4.9 0.0 1.0
HB2 A:ASP133 4.9 0.0 1.0
CA A:ASP129 5.0 0.0 1.0
HG2 A:GLU140 5.0 0.0 1.0
H A:VAL136 5.0 0.0 1.0
CB A:GLU140 5.0 0.0 1.0
CA A:ASP133 5.0 0.0 1.0

Reference:

J.L.Gifford, H.Ishida, H.J.Vogel. Fast Methionine-Based Solution Structure Determination of Calcium-Calmodulin Complexes. J.Biomol.uc(Nmr) V. 50 71 2011.
ISSN: ISSN 0925-2738
PubMed: 21360154
DOI: 10.1007/S10858-011-9495-3
Page generated: Fri Jul 12 14:04:33 2024

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