Calcium in PDB 2qv4: Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose

All present enzymatic activity of Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose:
3.2.1.1;

The structure of Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose, PDB code: 2qv4 was solved by L.K.Williams, R.Maurus, G.D.Brayer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.33 / 1.97
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.859, 67.723, 130.099, 90.00, 90.00, 90.00
R / Rfree (%)	17.6 / 22.4

The binding sites of Calcium atom in the Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose (pdb code 2qv4). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose, PDB code: 2qv4:

Calcium binding site 1 out of 1 in the Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human Pancreatic Alpha-Amylase Complexed with Nitrite and Acarbose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca498 b:13.2 occ:1.00 OD1 A:ASN100 2.4 17.0 1.0 O A:ARG158 2.4 14.8 1.0 O A:HIS201 2.4 13.7 1.0 O A:HOH758 2.4 17.5 1.0 OD2 A:ASP167 2.5 14.8 1.0 O A:HOH760 2.5 19.0 1.0 OD1 A:ASP167 2.6 13.1 1.0 O A:HOH502 2.6 10.5 1.0 CG A:ASP167 2.9 12.9 1.0 CG A:ASN100 3.4 16.3 1.0 C A:ARG158 3.5 15.0 1.0 C A:HIS201 3.6 13.9 1.0 ND2 A:ASN100 3.9 13.9 1.0 CA A:ARG158 4.1 14.8 1.0 CB A:HIS201 4.2 15.0 1.0 CB A:ASP167 4.4 12.6 1.0 O A:ASN100 4.4 13.8 1.0 CA A:HIS201 4.4 14.4 1.0 O A:HOH527 4.5 11.0 1.0 N A:ASP159 4.5 16.0 1.0 O A:CYS160 4.5 13.6 1.0 ND2 A:ASN137 4.5 15.1 1.0 N A:MET202 4.6 12.7 1.0 CA A:MET202 4.7 11.9 1.0 O A:VAL157 4.7 15.5 1.0 CA A:ASP159 4.8 15.3 1.0 CB A:ASN100 4.8 15.4 1.0 O A:LEU168 4.8 11.7 1.0 CG A:MET202 4.9 11.0 1.0 O A:HOH543 5.0 16.0 1.0 CB A:ARG158 5.0 15.1 1.0

R.Maurus, A.Begum, L.K.Williams, J.R.Fredriksen, R.Zhang, S.G.Withers, G.D.Brayer. Alternative Catalytic Anions Differentially Modulate Human Alpha-Amylase Activity and Specificity Biochemistry V. 47 3332 2008.
ISSN: ISSN 0006-2960
PubMed: 18284212
DOI: 10.1021/BI701652T