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Calcium in PDB 2yv7: Crystal Structure of the Clic Homolog From Drosophila Melanogaster

Protein crystallography data

The structure of Crystal Structure of the Clic Homolog From Drosophila Melanogaster, PDB code: 2yv7 was solved by S.J.Harrop, D.R.Littler, P.M.G.Curmi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.00 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.393, 63.451, 114.122, 90.00, 90.00, 90.00
R / Rfree (%) 21.6 / 25.4

Other elements in 2yv7:

The structure of Crystal Structure of the Clic Homolog From Drosophila Melanogaster also contains other interesting chemical elements:

Iodine (I) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Clic Homolog From Drosophila Melanogaster (pdb code 2yv7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Clic Homolog From Drosophila Melanogaster, PDB code: 2yv7:

Calcium binding site 1 out of 1 in 2yv7

Go back to Calcium Binding Sites List in 2yv7
Calcium binding site 1 out of 1 in the Crystal Structure of the Clic Homolog From Drosophila Melanogaster


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Clic Homolog From Drosophila Melanogaster within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca261

b:38.3
occ:1.00
O A:PRO85 2.6 31.6 1.0
O A:LEU95 2.6 38.9 1.0
O A:HIS83 2.6 40.6 1.0
OD1 A:ASN97 2.9 32.8 1.0
C A:PRO85 3.7 29.7 1.0
O A:HOH306 3.8 45.8 1.0
N A:PRO85 3.8 31.3 1.0
C A:LEU95 3.8 39.4 1.0
C A:PRO84 3.8 36.5 1.0
CG A:ASN97 3.8 37.1 1.0
C A:HIS83 3.9 44.2 1.0
O A:PRO84 3.9 36.4 1.0
CD A:PRO85 4.0 29.7 1.0
OG1 A:THR82 4.0 55.0 1.0
N A:ASN97 4.2 36.8 1.0
ND2 A:ASN97 4.3 34.5 1.0
CA A:PRO85 4.4 26.7 1.0
CA A:PRO84 4.5 36.4 1.0
CG A:PRO85 4.6 30.9 1.0
CD1 A:ILE100 4.6 32.5 1.0
C A:GLU96 4.6 35.6 1.0
CA A:GLU96 4.6 38.9 1.0
N A:PRO84 4.7 41.5 1.0
N A:GLU96 4.7 36.8 1.0
CG1 A:ILE86 4.7 32.4 1.0
CA A:LEU95 4.8 38.4 1.0
N A:ILE86 4.8 31.8 1.0
N A:HIS83 4.9 49.9 1.0
CA A:HIS83 4.9 50.4 1.0
CA A:ASN97 4.9 34.6 1.0
CB A:ASN97 5.0 30.8 1.0

Reference:

D.R.Littler, S.J.Harrop, L.J.Brown, G.J.Pankhurst, A.V.Mynott, P.Luciani, R.A.Mandyam, M.Mazzanti, S.Tanda, M.A.Berryman, S.N.Breit, P.M.G.Curmi. Comparison of Vertebrate and Invertebrate Clic Proteins: the Crystal Structures of Caenorhabditis Elegans Exc-4 and Drosophila Melanogaster Dmclic Proteins V. 71 364 2007.
ISSN: ISSN 0887-3585
PubMed: 17985355
DOI: 10.1002/PROT.21704
Page generated: Sat Dec 12 04:00:50 2020

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