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Calcium in PDB, part 103 (files: 4081-4120), PDB 2yi1-2z8s

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 4081-4120 (PDB 2yi1-2z8s).
  1. 2yi1 (Ca: 3) - Crystal Structure of N-Acetylmannosamine Kinase in Complex with N-Acetyl Mannosamine 6-Phosphate and Adp.
    Other atoms: Mg (1); Zn (1);
  2. 2yic (Ca: 4) - Crystal Structure of the Suca Domain of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase (Triclinic Form)
    Other atoms: Mg (4);
  3. 2yid (Ca: 4) - Crystal Structure of the Suca Domain of Mycobacterium Smegmatis Alpha-Ketoglutarate Decarboxylase in Complex with the Enamine-Thdp Intermediate
    Other atoms: Mg (4);
  4. 2yig (Ca: 4) - MMP13 in Complex with A Novel Selective Non Zinc Binding Inhibitor
    Other atoms: Zn (4); Na (3);
  5. 2yih (Ca: 1) - Structure of A Paenibacillus Polymyxa Xyloglucanase From Gh Family 44 with Xyloglucan
    Other atoms: Cl (1);
  6. 2yik (Ca: 3) - Catalytic Domain of Clostridium Thermocellum Celt
    Other atoms: Zn (1);
  7. 2yjq (Ca: 2) - Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44
    Other atoms: Cl (2);
  8. 2ykk (Ca: 1) - Structure of A Paenibacillus Polymyxa Xyloglucanase From Glycoside Hydrolase Family 44
    Other atoms: Cl (1);
  9. 2ykm (Ca: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase (Rt) in Complex with A Difluoromethylbenzoxazole (Dfmb) Pyrimidine Thioether Derivative, A Non-Nucleoside Rt Inhibitor (Nnrti)
    Other atoms: F (2);
  10. 2ykn (Ca: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase (Rt) in Complex with A Difluoromethylbenzoxazole (Dfmb) Pyrimidine Thioether Derivative, A Non-Nucleoside Rt Inhibitor (Nnrti)
    Other atoms: F (2);
  11. 2ylj (Ca: 2) - Horse Radish Peroxidase, Mutant S167Y
    Other atoms: Fe (1);
  12. 2yll (Ca: 2) - Inhibition of the Pneumococcal Virulence Factor Strh and Molecular Insights Into N-Glycan Recognition and Hydrolysis
    Other atoms: I (68);
  13. 2yn3 (Ca: 13) - Structural Insight Into the Giant Calcium-Binding Adhesin Siie: Implications For the Adhesion of Salmonella Enterica to Polarized Epithelial Cells
    Other atoms: I (2);
  14. 2yn5 (Ca: 9) - Structural Insight Into the Giant Calcium-Binding Adhesin Siie: Implications For the Adhesion of Salmonella Enterica to Polarized Epithelial Cells
  15. 2yoa (Ca: 7) - Synaptotagmin-1 C2B Domain with Phosphoserine
  16. 2yoc (Ca: 8) - Crystal Structure of Pula From Klebsiella Oxytoca
  17. 2yv7 (Ca: 1) - Crystal Structure of the Clic Homolog From Drosophila Melanogaster
    Other atoms: I (1);
  18. 2yv9 (Ca: 2) - Crystal Structure of the Clic Homologue Exc-4 From C. Elegans
  19. 2yz4 (Ca: 1) - The Neutron Structure of Concanavalin A at 2.2 Angstroms
    Other atoms: Mn (1);
  20. 2yz7 (Ca: 4) - X-Ray Analyses of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis
    Other atoms: Cl (8);
  21. 2z0j (Ca: 9) - Crystal Structure of Uncharacterized Conserved Protein From Thermus Thermophilus HB8
  22. 2z2d (Ca: 45) - Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor
    Other atoms: Cl (15); Zn (30);
  23. 2z2x (Ca: 7) - Crystal Structure of Mature Form of Tk-Subtilisin
  24. 2z2y (Ca: 14) - Crystal Structure of Autoprocessed Form of Tk-Subtilisin
    Other atoms: Zn (6);
  25. 2z2z (Ca: 7) - Crystal Structure of Unautoprocessed Form of Tk-Subtilisin Soaked By 10MM CACL2
  26. 2z30 (Ca: 7) - Crystal Structure of Complex Form Between Mat-Tk-Subtilisin and Tk-Propeptide
    Other atoms: Zn (1);
  27. 2z48 (Ca: 10) - Crystal Structure of Hemolytic Lectin Cel-III Complexed with Galnac
    Other atoms: Mg (4);
  28. 2z49 (Ca: 10) - Crystal Structure of Hemolytic Lectin Cel-III Complexed with Methyl-Alpha-D-Galactopylanoside
    Other atoms: Mg (4);
  29. 2z4e (Ca: 8) - Crystal Structure of D-Dimer From Human Fibrin Complexed with Gly-His-Arg-Pro-Tyr-Amide
  30. 2z56 (Ca: 7) - Crystal Structure of G56S-Propeptide:S324A-Subtilisin Complex
    Other atoms: Zn (1);
  31. 2z57 (Ca: 7) - Crystal Structure of G56E-Propeptide:S324A-Subtilisin Complex
    Other atoms: Zn (1);
  32. 2z58 (Ca: 7) - Crystal Structure of G56W-Propeptide:S324A-Subtilisin Complex
    Other atoms: Zn (1);
  33. 2z5g (Ca: 2) - Crystal Structure of T1 Lipase F16L Mutant
    Other atoms: Cl (2); Zn (2);
  34. 2z5z (Ca: 1) - Crystal Structure of the Complex of Buffalo Lactoperoxidase with Fluoride Ion at 3.5A Resolution
    Other atoms: F (3); I (9); Fe (1);
  35. 2z6i (Ca: 6) - Crystal Structure of S. Pneumoniae Enoyl-Acyl Carrier Protein Reductase (Fabk)
  36. 2z6j (Ca: 4) - Crystal Structure of S. Pneumoniae Enoyl-Acyl Carrier Protein Reductase (Fabk) in Complex with An Inhibitor
  37. 2z6m (Ca: 4) - Crystal Structure of Human Ferritin H8 As Biotemplate For Noble Metal Nanoparticle Synthesis
    Other atoms: Zn (5);
  38. 2z70 (Ca: 1) - E.Coli Rnase 1 in Complex with D(Cgcgatcgcg)
  39. 2z8r (Ca: 20) - Crystal Structure of Rhamnogalacturonan Lyase Yesw at 1.40 A Resolution
  40. 2z8s (Ca: 20) - Crystal Structure of Rhamnogalacturonan Lyase Yesw Complexed with Digalacturonic Acid
Page generated: Tue Jul 8 22:06:52 2025

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