Calcium in PDB 2z2d: Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor

Enzymatic activity of Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor

Other elements in 2z2d:

Calcium Binding Sites:

Calcium binding site 1 out of 3 in 2z2d

Calcium Binding Sites List in 2z2d

Calcium binding site 1 out of 3 in the Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca266 b:2.0 occ:1.00 OE1 A:GLU201 2.0 -0.9 1.0 O A:ILE180 2.1 -0.6 1.0 OD1 A:ASP198 2.2 -0.9 1.0 O A:GLY178 2.3 -0.6 1.0 OD2 A:ASP198 2.5 -0.9 1.0 CG A:ASP198 2.5 0.9 1.0 OD1 A:ASP175 2.7 -0.9 1.0 CD A:GLU201 3.0 0.9 1.0 HG13 A:ILE180 3.0 0.0 1.0 HA A:LEU181 3.1 0.0 1.0 H A:GLY178 3.2 0.4 1.0 HB3 A:GLU201 3.2 0.0 1.0 C A:ILE180 3.3 0.6 1.0 C A:GLY178 3.4 0.6 1.0 HD21 A:LEU181 3.4 0.0 1.0 HB2 A:ASP198 3.4 0.0 1.0 CB A:ASP198 3.6 -0.1 1.0 OE2 A:GLU201 3.6 -0.9 1.0 CG A:ASP175 3.7 0.9 1.0 N A:GLY178 3.8 -0.7 1.0 HB2 A:GLU201 3.9 0.0 1.0 HB3 A:ASP198 3.9 0.0 1.0 CB A:GLU201 3.9 0.0 1.0 CG A:GLU201 4.0 -0.1 1.0 CA A:GLY178 4.0 0.4 1.0 HA2 A:GLY178 4.0 0.0 1.0 CA A:LEU181 4.0 0.4 1.0 CG1 A:ILE180 4.1 0.0 1.0 HD22 A:LEU181 4.1 0.0 1.0 OD2 A:ASP175 4.1 -0.9 1.0 N A:LEU181 4.1 -0.7 1.0 N A:ILE180 4.2 -0.7 1.0 C A:GLY179 4.2 0.6 1.0 CD2 A:LEU181 4.2 0.0 1.0 CA A:ILE180 4.3 0.4 1.0 HD13 A:ILE180 4.3 0.0 1.0 H A:LYS177 4.3 0.4 1.0 O A:GLY179 4.4 -0.6 1.0 HD12 A:ILE180 4.4 0.0 1.0 HA2 A:GLY176 4.4 0.0 1.0 O A:ASP198 4.5 -0.6 1.0 N A:GLY179 4.5 -0.7 1.0 CD1 A:ILE180 4.5 0.0 1.0 HG3 A:GLU201 4.6 0.0 1.0 H A:ILE180 4.6 0.4 1.0 HG12 A:ILE180 4.6 0.0 1.0 HG2 A:GLU201 4.6 0.0 1.0 N A:LYS177 4.7 -0.7 1.0 C A:LEU181 4.7 0.6 1.0 H A:ASP198 4.8 0.4 1.0 O A:LEU181 4.8 -0.6 1.0 CA A:ASP198 4.8 0.4 1.0 CA A:GLY179 4.8 0.4 1.0 CB A:ILE180 4.8 0.0 1.0 HZ2 A:TRP203 4.9 0.1 1.0 HD23 A:LEU181 4.9 0.0 1.0 HA3 A:GLY179 4.9 0.0 1.0

Calcium binding site 2 out of 3 in 2z2d

Calcium Binding Sites List in 2z2d

Calcium binding site 2 out of 3 in the Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca267 b:2.0 occ:1.00 OD1 A:ASP194 2.0 -0.9 1.0 O A:GLY192 2.3 -0.6 1.0 O A:ASP158 2.4 -0.6 1.0 O A:GLY190 2.4 -0.6 1.0 CG A:ASP194 3.2 0.9 1.0 C A:GLY192 3.3 0.6 1.0 HA3 A:GLY193 3.4 0.0 1.0 HB2 A:LEU160 3.4 0.0 1.0 HD21 A:LEU160 3.5 0.0 1.0 C A:ASP158 3.6 0.6 1.0 C A:GLY190 3.6 0.6 1.0 H A:LEU160 3.7 0.4 1.0 O A:ALA157 3.7 -0.6 1.0 OD2 A:ASP194 3.7 -0.9 1.0 H A:ASP194 3.8 0.4 1.0 N A:ASP194 3.8 -0.7 1.0 C A:GLY193 3.9 0.6 1.0 C A:ILE191 3.9 0.6 1.0 N A:GLY193 4.0 -0.7 1.0 CA A:GLY193 4.0 0.4 1.0 HA A:ASP158 4.0 0.0 1.0 O A:ILE191 4.0 -0.6 1.0 HD12 A:LEU160 4.0 0.0 1.0 N A:GLY192 4.1 -0.7 1.0 HA A:ILE159 4.1 0.0 1.0 N A:GLY190 4.2 -0.7 1.0 N A:LEU160 4.3 -0.7 1.0 CB A:ASP194 4.4 -0.1 1.0 CA A:ASP158 4.4 0.4 1.0 CA A:GLY192 4.4 0.4 1.0 CA A:GLY190 4.5 0.4 1.0 CB A:LEU160 4.5 0.0 1.0 HA A:ASP194 4.5 0.0 1.0 O A:GLY193 4.5 -0.6 1.0 CD2 A:LEU160 4.5 0.0 1.0 CA A:ASP194 4.5 0.4 1.0 HA A:ILE191 4.5 0.0 1.0 N A:ILE191 4.5 -0.7 1.0 HA2 A:GLY190 4.6 0.0 1.0 N A:ILE159 4.6 -0.7 1.0 H A:GLY190 4.6 0.4 1.0 CA A:ILE191 4.6 0.4 1.0 H A:GLY192 4.7 0.4 1.0 C A:ALA157 4.7 0.6 1.0 C A:SER189 4.7 0.6 1.0 CA A:ILE159 4.7 0.4 1.0 HA A:SER189 4.8 0.0 1.0 CD1 A:LEU160 4.8 0.0 1.0 CG A:LEU160 4.9 0.0 1.0 C A:ILE159 4.9 0.6 1.0 HD22 A:LEU160 4.9 0.0 1.0 H A:GLY193 4.9 0.4 1.0 N A:ASP158 4.9 -0.7 1.0 HA3 A:GLY192 5.0 0.0 1.0

Calcium binding site 3 out of 3 in 2z2d

Calcium Binding Sites List in 2z2d

Calcium binding site 3 out of 3 in the Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Solution Structure of Human Macrophage Elastase (Mmp-12) Catalytic Domain Complexed with A Gamma-Keto Butanoic Acid Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca268 b:2.0 occ:1.00 OE2 A:GLU199 2.0 -0.9 1.0 OD2 A:ASP124 2.1 -0.9 1.0 O A:GLU199 2.1 -0.6 1.0 O A:GLU201 2.5 -0.6 1.0 HD1 A:TRP203 2.6 0.1 1.0 CG A:ASP124 3.0 0.9 1.0 CD A:GLU199 3.1 0.9 1.0 OD1 A:ASP124 3.2 -0.9 1.0 HG3 A:GLU199 3.2 0.0 1.0 C A:GLU199 3.3 0.6 1.0 CD1 A:TRP203 3.6 -0.3 1.0 CG A:GLU199 3.7 -0.1 1.0 H A:TRP203 3.7 0.4 1.0 HA A:PHE202 3.7 0.0 1.0 HA A:GLU199 3.7 0.0 1.0 C A:GLU201 3.8 0.6 1.0 CA A:GLU199 4.0 0.4 1.0 O A:ASP200 4.0 -0.6 1.0 HE1 A:TRP203 4.1 0.3 1.0 C A:ASP200 4.2 0.6 1.0 OE1 A:GLU199 4.2 -0.9 1.0 NE1 A:TRP203 4.2 0.0 1.0 CB A:ASP124 4.3 -0.1 1.0 N A:ASP200 4.3 -0.7 1.0 CB A:GLU199 4.4 0.0 1.0 HB2 A:ASP124 4.4 0.0 1.0 HA A:ASP200 4.5 0.0 1.0 N A:GLU201 4.5 -0.7 1.0 N A:TRP203 4.5 -0.7 1.0 HG2 A:PRO123 4.6 0.0 1.0 H A:MET125 4.6 0.4 1.0 CA A:PHE202 4.6 0.4 1.0 HB3 A:ASP124 4.6 0.0 1.0 CA A:ASP200 4.6 0.4 1.0 HG2 A:GLU199 4.6 0.0 1.0 N A:PHE202 4.7 -0.7 1.0 HG2 A:GLU201 4.7 0.0 1.0 HB2 A:TRP203 4.7 0.0 1.0 CG A:TRP203 4.7 -0.2 1.0 CA A:GLU201 4.8 0.4 1.0 HB3 A:GLU199 4.8 0.0 1.0 H A:ASP124 4.9 0.4 1.0

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