Calcium in PDB 5jtj: USP7CD-Ctp in Complex with Ubiquitin

All present enzymatic activity of USP7CD-Ctp in Complex with Ubiquitin:
3.4.19.12;

The structure of USP7CD-Ctp in Complex with Ubiquitin, PDB code: 5jtj was solved by J.M.Murray, L.Rouge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	74.03 / 3.32
Space group	P 62 2 2
Cell size a, b, c (Å), α, β, γ (°)	148.060, 148.060, 179.950, 90.00, 90.00, 120.00
R / Rfree (%)	19.1 / 20.9

The binding sites of Calcium atom in the USP7CD-Ctp in Complex with Ubiquitin (pdb code 5jtj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the USP7CD-Ctp in Complex with Ubiquitin, PDB code: 5jtj:

Calcium binding site 1 out of 1 in the USP7CD-Ctp in Complex with Ubiquitin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of USP7CD-Ctp in Complex with Ubiquitin within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1201 b:0.1 occ:0.50 NE2 A:HIS501 3.2 1.0 1.0 NH2 A:ARG424 3.8 96.3 1.0 CB A:GLU495 3.9 0.1 1.0 CE1 A:HIS501 4.0 0.8 1.0 O A:GLU495 4.0 0.3 1.0 CD2 A:HIS501 4.2 0.9 1.0 C A:GLU495 4.5 0.2 1.0 CA A:GLU495 4.6 0.5 1.0 CZ A:ARG424 4.9 95.1 1.0 OE1 A:GLU495 4.9 0.3 1.0

L.Rouge, T.W.Bainbridge, M.Kwok, R.Tong, P.Di Lello, I.E.Wertz, T.Maurer, J.A.Ernst, J.Murray. Molecular Understanding of USP7 Substrate Recognition and C-Terminal Activation. Structure V. 24 1335 2016.
ISSN: ISSN 0969-2126
PubMed: 27452404
DOI: 10.1016/J.STR.2016.05.020