Calcium in PDB 5xqg: Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Protein crystallography data
The structure of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose, PDB code: 5xqg
was solved by
Y.Kunishige,
M.Iwai,
T.Tada,
S.Nishimura,
T.Sakamoto,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
171.19 /
2.74
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
167.878,
171.935,
342.380,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
18.8 /
24.7
|
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
(pdb code 5xqg). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the
Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose, PDB code: 5xqg:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Calcium binding site 1 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 1 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca1003
b:11.1
occ:1.00
|
OD2
|
A:ASP562
|
2.0
|
21.5
|
1.0
|
OD2
|
A:ASP621
|
2.2
|
17.2
|
1.0
|
ND2
|
A:ASN585
|
2.2
|
20.7
|
1.0
|
OD1
|
A:ASP621
|
2.2
|
18.7
|
1.0
|
NE2
|
A:HIS616
|
2.3
|
19.3
|
1.0
|
ND1
|
A:HIS639
|
2.3
|
17.2
|
1.0
|
CG
|
A:ASP621
|
2.5
|
18.0
|
1.0
|
CE1
|
A:HIS639
|
3.1
|
18.1
|
1.0
|
CD2
|
A:HIS616
|
3.1
|
19.7
|
1.0
|
CG
|
A:ASN585
|
3.1
|
21.1
|
1.0
|
CG
|
A:ASP562
|
3.2
|
20.7
|
1.0
|
CE1
|
A:HIS616
|
3.4
|
20.8
|
1.0
|
CG
|
A:HIS639
|
3.4
|
18.2
|
1.0
|
OD1
|
A:ASN585
|
3.7
|
21.7
|
1.0
|
CB
|
A:HIS639
|
3.8
|
18.1
|
1.0
|
CB
|
A:ASP562
|
4.0
|
19.5
|
1.0
|
CB
|
A:ASP621
|
4.0
|
18.7
|
1.0
|
CA
|
A:ASN585
|
4.1
|
20.7
|
1.0
|
OD1
|
A:ASP562
|
4.1
|
21.8
|
1.0
|
CB
|
A:ASN585
|
4.2
|
21.4
|
1.0
|
NE2
|
A:HIS639
|
4.2
|
18.4
|
1.0
|
N
|
A:ASN585
|
4.3
|
20.7
|
1.0
|
CB
|
A:TRP583
|
4.3
|
20.4
|
1.0
|
CG
|
A:HIS616
|
4.3
|
20.3
|
1.0
|
CD2
|
A:HIS639
|
4.4
|
18.6
|
1.0
|
ND1
|
A:HIS616
|
4.4
|
21.6
|
1.0
|
CA
|
A:HIS639
|
4.5
|
18.5
|
1.0
|
CA
|
A:ASP621
|
4.8
|
19.3
|
1.0
|
CG
|
A:TRP583
|
4.9
|
21.6
|
1.0
|
N
|
A:ASP621
|
5.0
|
19.7
|
1.0
|
|
Calcium binding site 2 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 2 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca1003
b:11.3
occ:1.00
|
OD2
|
B:ASP562
|
2.0
|
21.4
|
1.0
|
OD1
|
B:ASP621
|
2.1
|
22.2
|
1.0
|
OD2
|
B:ASP621
|
2.2
|
21.4
|
1.0
|
ND2
|
B:ASN585
|
2.3
|
20.2
|
1.0
|
ND1
|
B:HIS639
|
2.4
|
18.9
|
1.0
|
NE2
|
B:HIS616
|
2.4
|
18.6
|
1.0
|
CG
|
B:ASP621
|
2.4
|
21.7
|
1.0
|
CE1
|
B:HIS639
|
3.1
|
19.6
|
1.0
|
CD2
|
B:HIS616
|
3.2
|
19.8
|
1.0
|
CG
|
B:ASP562
|
3.2
|
19.7
|
1.0
|
CG
|
B:ASN585
|
3.2
|
20.9
|
1.0
|
CG
|
B:HIS639
|
3.5
|
18.9
|
1.0
|
CE1
|
B:HIS616
|
3.6
|
20.2
|
1.0
|
OD1
|
B:ASN585
|
3.8
|
21.7
|
1.0
|
CB
|
B:HIS639
|
3.9
|
18.2
|
1.0
|
CB
|
B:ASP562
|
3.9
|
18.7
|
1.0
|
CB
|
B:ASP621
|
3.9
|
21.9
|
1.0
|
OD1
|
B:ASP562
|
4.0
|
20.4
|
1.0
|
CA
|
B:ASN585
|
4.1
|
18.9
|
1.0
|
CB
|
B:ASN585
|
4.2
|
20.6
|
1.0
|
N
|
B:ASN585
|
4.3
|
18.6
|
1.0
|
NE2
|
B:HIS639
|
4.3
|
19.7
|
1.0
|
CB
|
B:TRP583
|
4.4
|
23.3
|
1.0
|
CG
|
B:HIS616
|
4.4
|
19.8
|
1.0
|
CD2
|
B:HIS639
|
4.5
|
20.0
|
1.0
|
ND1
|
B:HIS616
|
4.6
|
19.9
|
1.0
|
CA
|
B:HIS639
|
4.6
|
18.3
|
1.0
|
CA
|
B:ASP621
|
4.8
|
21.6
|
1.0
|
CG
|
B:TRP583
|
5.0
|
23.4
|
1.0
|
|
Calcium binding site 3 out
of 8 in 5xqg
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Calcium Binding Sites List in 5xqg
Calcium binding site 3 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca1003
b:9.6
occ:1.00
|
OD2
|
C:ASP562
|
2.0
|
22.4
|
1.0
|
OD1
|
C:ASP621
|
2.0
|
24.0
|
1.0
|
ND2
|
C:ASN585
|
2.2
|
21.2
|
1.0
|
ND1
|
C:HIS639
|
2.2
|
20.6
|
1.0
|
OD2
|
C:ASP621
|
2.3
|
22.3
|
1.0
|
NE2
|
C:HIS616
|
2.3
|
21.3
|
1.0
|
CG
|
C:ASP621
|
2.4
|
23.2
|
1.0
|
CE1
|
C:HIS639
|
3.0
|
20.2
|
1.0
|
CG
|
C:ASN585
|
3.1
|
23.0
|
1.0
|
CG
|
C:ASP562
|
3.2
|
21.5
|
1.0
|
CD2
|
C:HIS616
|
3.2
|
22.6
|
1.0
|
CG
|
C:HIS639
|
3.3
|
20.4
|
1.0
|
CE1
|
C:HIS616
|
3.3
|
23.4
|
1.0
|
OD1
|
C:ASN585
|
3.6
|
24.4
|
1.0
|
CB
|
C:HIS639
|
3.7
|
20.5
|
1.0
|
CB
|
C:ASP621
|
3.9
|
23.2
|
1.0
|
CB
|
C:ASP562
|
4.0
|
21.6
|
1.0
|
OD1
|
C:ASP562
|
4.1
|
19.8
|
1.0
|
CA
|
C:ASN585
|
4.1
|
24.4
|
1.0
|
NE2
|
C:HIS639
|
4.1
|
20.2
|
1.0
|
CB
|
C:ASN585
|
4.2
|
23.8
|
1.0
|
CB
|
C:TRP583
|
4.3
|
22.5
|
1.0
|
N
|
C:ASN585
|
4.3
|
25.1
|
1.0
|
CD2
|
C:HIS639
|
4.3
|
20.4
|
1.0
|
CG
|
C:HIS616
|
4.4
|
21.7
|
1.0
|
CA
|
C:HIS639
|
4.4
|
20.6
|
1.0
|
ND1
|
C:HIS616
|
4.4
|
23.2
|
1.0
|
CA
|
C:ASP621
|
4.8
|
23.2
|
1.0
|
CG
|
C:TRP583
|
4.8
|
24.9
|
1.0
|
N
|
C:ASP621
|
4.9
|
23.6
|
1.0
|
|
Calcium binding site 4 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 4 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca1003
b:12.0
occ:1.00
|
OD2
|
D:ASP562
|
2.0
|
26.6
|
1.0
|
OD1
|
D:ASP621
|
2.2
|
24.7
|
1.0
|
ND2
|
D:ASN585
|
2.2
|
24.7
|
1.0
|
OD2
|
D:ASP621
|
2.2
|
23.5
|
1.0
|
NE2
|
D:HIS616
|
2.3
|
19.8
|
1.0
|
ND1
|
D:HIS639
|
2.4
|
25.6
|
1.0
|
CG
|
D:ASP621
|
2.5
|
25.2
|
1.0
|
CG
|
D:ASN585
|
3.1
|
26.5
|
1.0
|
CD2
|
D:HIS616
|
3.2
|
20.5
|
1.0
|
CE1
|
D:HIS639
|
3.2
|
26.4
|
1.0
|
CG
|
D:ASP562
|
3.2
|
26.4
|
1.0
|
CE1
|
D:HIS616
|
3.3
|
21.9
|
1.0
|
CG
|
D:HIS639
|
3.4
|
24.8
|
1.0
|
OD1
|
D:ASN585
|
3.5
|
28.8
|
1.0
|
CB
|
D:HIS639
|
3.7
|
23.5
|
1.0
|
CB
|
D:ASP621
|
4.0
|
25.2
|
1.0
|
CB
|
D:ASP562
|
4.0
|
25.9
|
1.0
|
CA
|
D:ASN585
|
4.1
|
26.3
|
1.0
|
CB
|
D:ASN585
|
4.2
|
26.1
|
1.0
|
OD1
|
D:ASP562
|
4.2
|
25.9
|
1.0
|
CB
|
D:TRP583
|
4.3
|
21.0
|
1.0
|
N
|
D:ASN585
|
4.3
|
25.8
|
1.0
|
NE2
|
D:HIS639
|
4.4
|
26.9
|
1.0
|
CG
|
D:HIS616
|
4.4
|
20.4
|
1.0
|
CA
|
D:HIS639
|
4.4
|
22.9
|
1.0
|
ND1
|
D:HIS616
|
4.4
|
21.4
|
1.0
|
CD2
|
D:HIS639
|
4.4
|
26.6
|
1.0
|
CA
|
D:ASP621
|
4.8
|
25.4
|
1.0
|
CG
|
D:TRP583
|
4.9
|
21.8
|
1.0
|
N
|
D:ASP621
|
5.0
|
25.5
|
1.0
|
|
Calcium binding site 5 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 5 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Ca1003
b:12.4
occ:1.00
|
OD2
|
E:ASP562
|
2.1
|
22.9
|
1.0
|
ND2
|
E:ASN585
|
2.1
|
18.3
|
1.0
|
OD1
|
E:ASP621
|
2.2
|
21.6
|
1.0
|
ND1
|
E:HIS639
|
2.2
|
20.0
|
1.0
|
OD2
|
E:ASP621
|
2.3
|
22.3
|
1.0
|
NE2
|
E:HIS616
|
2.3
|
19.1
|
1.0
|
CG
|
E:ASP621
|
2.5
|
21.9
|
1.0
|
CG
|
E:ASN585
|
2.8
|
19.4
|
1.0
|
CE1
|
E:HIS639
|
2.9
|
20.6
|
1.0
|
OD1
|
E:ASN585
|
3.2
|
21.6
|
1.0
|
CG
|
E:ASP562
|
3.2
|
21.6
|
1.0
|
CE1
|
E:HIS616
|
3.3
|
20.2
|
1.0
|
CD2
|
E:HIS616
|
3.3
|
20.3
|
1.0
|
CG
|
E:HIS639
|
3.4
|
20.9
|
1.0
|
CB
|
E:HIS639
|
3.9
|
20.1
|
1.0
|
CB
|
E:ASN585
|
4.0
|
20.0
|
1.0
|
CB
|
E:ASP621
|
4.0
|
21.8
|
1.0
|
CB
|
E:ASP562
|
4.0
|
20.6
|
1.0
|
CA
|
E:ASN585
|
4.1
|
20.0
|
1.0
|
OD1
|
E:ASP562
|
4.1
|
21.6
|
1.0
|
NE2
|
E:HIS639
|
4.1
|
21.2
|
1.0
|
N
|
E:ASN585
|
4.3
|
19.9
|
1.0
|
CB
|
E:TRP583
|
4.3
|
19.8
|
1.0
|
CD2
|
E:HIS639
|
4.4
|
21.4
|
1.0
|
ND1
|
E:HIS616
|
4.4
|
20.1
|
1.0
|
CG
|
E:HIS616
|
4.5
|
20.1
|
1.0
|
CA
|
E:HIS639
|
4.5
|
20.1
|
1.0
|
CA
|
E:ASP621
|
4.8
|
21.8
|
1.0
|
CG
|
E:TRP583
|
4.9
|
20.4
|
1.0
|
OG1
|
E:THR617
|
5.0
|
28.0
|
1.0
|
|
Calcium binding site 6 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 6 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Ca1003
b:11.7
occ:1.00
|
OD2
|
F:ASP562
|
2.1
|
23.2
|
1.0
|
OD1
|
F:ASP621
|
2.1
|
21.3
|
1.0
|
ND2
|
F:ASN585
|
2.1
|
17.8
|
1.0
|
OD2
|
F:ASP621
|
2.2
|
21.8
|
1.0
|
NE2
|
F:HIS616
|
2.3
|
20.0
|
1.0
|
ND1
|
F:HIS639
|
2.3
|
19.6
|
1.0
|
CG
|
F:ASP621
|
2.5
|
21.6
|
1.0
|
CG
|
F:ASN585
|
3.0
|
18.4
|
1.0
|
CE1
|
F:HIS639
|
3.0
|
20.8
|
1.0
|
CD2
|
F:HIS616
|
3.2
|
20.5
|
1.0
|
CG
|
F:ASP562
|
3.2
|
22.0
|
1.0
|
CE1
|
F:HIS616
|
3.3
|
22.3
|
1.0
|
CG
|
F:HIS639
|
3.4
|
20.7
|
1.0
|
OD1
|
F:ASN585
|
3.5
|
20.0
|
1.0
|
CB
|
F:HIS639
|
3.9
|
20.3
|
1.0
|
CB
|
F:ASP621
|
4.0
|
21.5
|
1.0
|
CB
|
F:ASP562
|
4.0
|
21.8
|
1.0
|
OD1
|
F:ASP562
|
4.1
|
22.3
|
1.0
|
CA
|
F:ASN585
|
4.1
|
18.8
|
1.0
|
CB
|
F:ASN585
|
4.1
|
19.1
|
1.0
|
NE2
|
F:HIS639
|
4.2
|
20.8
|
1.0
|
N
|
F:ASN585
|
4.3
|
18.9
|
1.0
|
CG
|
F:HIS616
|
4.4
|
21.6
|
1.0
|
CB
|
F:TRP583
|
4.4
|
20.2
|
1.0
|
ND1
|
F:HIS616
|
4.4
|
22.4
|
1.0
|
CD2
|
F:HIS639
|
4.4
|
21.4
|
1.0
|
CA
|
F:HIS639
|
4.5
|
21.2
|
1.0
|
CA
|
F:ASP621
|
4.9
|
20.9
|
1.0
|
CG
|
F:TRP583
|
5.0
|
20.6
|
1.0
|
|
Calcium binding site 7 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 7 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Ca1003
b:18.6
occ:1.00
|
OD2
|
G:ASP562
|
1.9
|
22.8
|
1.0
|
OD1
|
G:ASP621
|
2.0
|
20.3
|
1.0
|
ND2
|
G:ASN585
|
2.2
|
32.8
|
1.0
|
ND1
|
G:HIS639
|
2.2
|
23.2
|
1.0
|
OD2
|
G:ASP621
|
2.3
|
19.6
|
1.0
|
NE2
|
G:HIS616
|
2.4
|
22.8
|
1.0
|
CG
|
G:ASP621
|
2.5
|
20.9
|
1.0
|
CE1
|
G:HIS639
|
3.0
|
23.0
|
1.0
|
CG
|
G:ASP562
|
3.1
|
24.1
|
1.0
|
CG
|
G:ASN585
|
3.1
|
31.0
|
1.0
|
CG
|
G:HIS639
|
3.3
|
25.7
|
1.0
|
CE1
|
G:HIS616
|
3.4
|
23.6
|
1.0
|
CD2
|
G:HIS616
|
3.4
|
23.0
|
1.0
|
OD1
|
G:ASN585
|
3.5
|
31.6
|
1.0
|
CB
|
G:HIS639
|
3.7
|
27.2
|
1.0
|
CB
|
G:ASP562
|
3.9
|
23.9
|
1.0
|
CB
|
G:ASP621
|
4.0
|
21.2
|
1.0
|
OD1
|
G:ASP562
|
4.0
|
23.7
|
1.0
|
NE2
|
G:HIS639
|
4.2
|
22.9
|
1.0
|
CB
|
G:ASN585
|
4.3
|
28.7
|
1.0
|
CB
|
G:TRP583
|
4.3
|
24.8
|
1.0
|
CA
|
G:ASN585
|
4.3
|
28.9
|
1.0
|
CD2
|
G:HIS639
|
4.4
|
24.6
|
1.0
|
N
|
G:ASN585
|
4.4
|
28.9
|
1.0
|
CA
|
G:HIS639
|
4.4
|
27.7
|
1.0
|
ND1
|
G:HIS616
|
4.5
|
22.8
|
1.0
|
CG
|
G:HIS616
|
4.5
|
23.9
|
1.0
|
CA
|
G:ASP621
|
4.8
|
22.0
|
1.0
|
CG
|
G:TRP583
|
4.8
|
24.2
|
1.0
|
N
|
G:ASP621
|
4.9
|
21.9
|
1.0
|
|
Calcium binding site 8 out
of 8 in 5xqg
Go back to
Calcium Binding Sites List in 5xqg
Calcium binding site 8 out
of 8 in the Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of A Pl 26 Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum Complexed with Unsaturated Galacturonosyl Rhamnose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Ca1003
b:19.2
occ:1.00
|
OD2
|
H:ASP562
|
2.0
|
22.8
|
1.0
|
OD1
|
H:ASP621
|
2.0
|
26.6
|
1.0
|
ND1
|
H:HIS639
|
2.2
|
22.7
|
1.0
|
OD2
|
H:ASP621
|
2.3
|
26.2
|
1.0
|
ND2
|
H:ASN585
|
2.3
|
26.2
|
1.0
|
NE2
|
H:HIS616
|
2.3
|
22.4
|
1.0
|
CG
|
H:ASP621
|
2.4
|
27.3
|
1.0
|
CE1
|
H:HIS639
|
3.0
|
22.1
|
1.0
|
CG
|
H:ASP562
|
3.1
|
24.5
|
1.0
|
CG
|
H:ASN585
|
3.2
|
26.4
|
1.0
|
CD2
|
H:HIS616
|
3.2
|
21.7
|
1.0
|
CG
|
H:HIS639
|
3.3
|
24.4
|
1.0
|
CE1
|
H:HIS616
|
3.4
|
22.9
|
1.0
|
OD1
|
H:ASN585
|
3.6
|
29.1
|
1.0
|
CB
|
H:HIS639
|
3.7
|
25.1
|
1.0
|
CB
|
H:ASP562
|
3.9
|
23.7
|
1.0
|
CB
|
H:ASP621
|
4.0
|
25.9
|
1.0
|
OD1
|
H:ASP562
|
4.1
|
22.7
|
1.0
|
NE2
|
H:HIS639
|
4.1
|
22.7
|
1.0
|
CD2
|
H:HIS639
|
4.3
|
23.8
|
1.0
|
CB
|
H:ASN585
|
4.3
|
25.5
|
1.0
|
CA
|
H:ASN585
|
4.3
|
25.9
|
1.0
|
CG
|
H:HIS616
|
4.4
|
22.4
|
1.0
|
CB
|
H:TRP583
|
4.4
|
23.1
|
1.0
|
N
|
H:ASN585
|
4.5
|
27.3
|
1.0
|
ND1
|
H:HIS616
|
4.5
|
22.6
|
1.0
|
CA
|
H:HIS639
|
4.5
|
25.9
|
1.0
|
CA
|
H:ASP621
|
4.8
|
26.2
|
1.0
|
N
|
H:ASP621
|
4.9
|
26.2
|
1.0
|
CG
|
H:TRP583
|
4.9
|
22.5
|
1.0
|
|
Reference:
Y.Kunishige,
M.Iwai,
M.Nakazawa,
M.Ueda,
T.Tada,
S.Nishimura,
T.Sakamoto.
Crystal Structure of Exo-Rhamnogalacturonan Lyase From Penicillium Chrysogenum As A Member of Polysaccharide Lyase Family 26 Febs Lett. V. 592 1378 2018.
ISSN: ISSN 1873-3468
PubMed: 29574769
DOI: 10.1002/1873-3468.13034
Page generated: Mon Jul 15 15:04:20 2024
|