Calcium in PDB 6qix: The Crystal Structure of Trichuris Muris P43

Protein crystallography data

The structure of The Crystal Structure of Trichuris Muris P43, PDB code: 6qix was solved by C.W.Levy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.34 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.682, 164.834, 61.169, 90.00, 110.37, 90.00
R / Rfree (%) 15 / 18.9

Calcium Binding Sites:

The binding sites of Calcium atom in the The Crystal Structure of Trichuris Muris P43 (pdb code 6qix). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Crystal Structure of Trichuris Muris P43, PDB code: 6qix:

Calcium binding site 1 out of 1 in 6qix

Go back to Calcium Binding Sites List in 6qix
Calcium binding site 1 out of 1 in the The Crystal Structure of Trichuris Muris P43


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Crystal Structure of Trichuris Muris P43 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca407

b:81.7
occ:1.00
O B:HOH652 2.5 26.2 1.0
O B:HOH740 2.5 44.7 1.0
O A:HOH758 2.7 34.3 1.0
O A:HOH576 2.8 30.7 1.0
O A:HOH747 2.8 43.3 1.0
O B:HOH772 3.0 44.3 1.0
HZ3 B:LYS267 3.8 39.5 1.0
HZ3 A:LYS267 3.9 37.7 1.0
OD1 A:ASP273 4.1 15.1 1.0
O B:HOH588 4.2 46.8 1.0
HB3 A:ASP272 4.2 26.4 1.0
OD1 B:ASP273 4.2 17.2 1.0
HB2 A:ASP272 4.3 26.4 1.0
HZ1 B:LYS267 4.4 39.5 1.0
NZ B:LYS267 4.4 33.0 1.0
HZ2 B:LYS267 4.6 39.5 1.0
HB3 B:ASP272 4.6 24.0 1.0
NZ A:LYS267 4.6 31.4 1.0
HZ1 A:LYS267 4.6 37.7 1.0
CB A:ASP272 4.7 22.0 1.0
HB2 B:ASP272 4.7 24.0 1.0
HZ2 A:LYS267 4.9 37.7 1.0
O A:ASP272 4.9 17.0 1.0
CG A:ASP273 4.9 12.8 1.0

Reference:

A.J.Bancroft, C.W.Levy, T.A.Jowitt, K.S.Hayes, S.Thompson, E.A.Mckenzie, M.D.Ball, E.Dubaissi, A.P.France, B.Bellina, C.Sharpe, A.Mironov, S.L.Brown, P.C.Cook, A.S Macdonald, D.J.Thornton, R.K.Grencis. The Major Secreted Protein of the Whipworm Parasite Tethers to Matrix and Inhibits Interleukin-13 Function. Nat Commun V. 10 2344 2019.
ISSN: ESSN 2041-1723
PubMed: 31138806
DOI: 10.1038/S41467-019-09996-Z
Page generated: Sat Dec 12 07:27:36 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy