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Calcium in PDB 7bwr: Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State"

Enzymatic activity of Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State"

All present enzymatic activity of Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State":
2.4.2.34;

Calcium Binding Sites:

The binding sites of Calcium atom in the Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State" (pdb code 7bwr). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State", PDB code: 7bwr:

Calcium binding site 1 out of 1 in 7bwr

Go back to Calcium Binding Sites List in 7bwr
Calcium binding site 1 out of 1 in the Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State"


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Mycobacterium Smegmatis Arabinosyltransferase Complex EMBB2-ACPM2 in Substrate Dpa Bound Asymmetric "Active State" within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2001

b:0.6
occ:1.00
OD2 A:ASP936 1.6 51.8 1.0
O A:ASP943 2.5 54.5 1.0
CG A:ASP936 2.7 51.8 1.0
OD1 A:ASP936 3.1 51.8 1.0
O A:SER938 3.1 54.0 1.0
C A:ASP943 3.7 54.5 1.0
CG A:GLN834 3.9 60.5 1.0
CB A:ASP936 4.0 51.8 1.0
O A:SER940 4.0 61.6 1.0
O A:THR828 4.1 49.0 1.0
O A:ASP936 4.2 51.8 1.0
C A:SER938 4.3 54.0 1.0
OG1 A:THR828 4.4 49.0 1.0
CA A:TRP944 4.5 45.0 1.0
N A:TRP944 4.5 45.0 1.0
CB A:GLN834 4.6 60.5 1.0
CA A:LEU939 4.7 58.0 1.0
CB A:ASP943 4.8 54.5 1.0
CA A:ASP943 4.8 54.5 1.0
CB A:TRP944 4.9 45.0 1.0
N A:LEU939 4.9 58.0 1.0
C A:ASP936 4.9 51.8 1.0
C A:LEU939 5.0 58.0 1.0
CA A:ASP936 5.0 51.8 1.0

Reference:

L.Zhang, Y.Zhao, R.Gao, J.Li, X.Yang, Y.Gao, W.Zhao, S.S.Gurcha, N.Veerapen, S.M.Batt, K.K.Besra, W.Xu, L.Bi, X.Zhang, L.W.Guddat, H.Yang, Q.Wang, G.S.Besra, Z.Rao. Cryo-Em Snapshots of Mycobacterial Arabinosyltransferase Complex EMBB2-ACPM2. Protein Cell 2020.
ISSN: ESSN 1674-8018
PubMed: 32363534
DOI: 10.1007/S13238-020-00726-6
Page generated: Thu Jul 18 23:23:14 2024

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