Calcium in PDB 2lcp: uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1

The binding sites of Calcium atom in the uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1 (pdb code 2lcp). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1, PDB code: 2lcp:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca600 b:1.8 occ:1.00 HB2 A:ASN75 2.5 2.5 1.0 HG3 A:GLU81 2.5 2.5 1.0 OE1 A:GLU84 2.5 2.1 1.0 OD1 A:ASP73 2.6 1.9 1.0 O A:ARG79 2.8 1.8 1.0 OE2 A:GLU84 2.8 1.9 1.0 OD1 A:ASP77 2.8 2.3 1.0 OD1 A:ASN75 2.9 2.2 1.0 CD A:GLU84 3.0 1.6 1.0 H A:ASN75 3.0 2.4 1.0 CB A:ASN75 3.3 2.3 1.0 CG A:ASN75 3.4 2.4 1.0 CG A:ASP77 3.4 2.4 1.0 CG A:ASP73 3.5 2.0 1.0 H A:GLU81 3.5 1.6 1.0 CG A:GLU81 3.5 2.0 1.0 HA A:ILE80 3.6 1.6 1.0 OD2 A:ASP77 3.6 3.0 1.0 OD2 A:ASP73 3.6 2.3 1.0 CD A:GLU81 3.8 2.0 1.0 H A:ASP77 3.8 2.6 1.0 N A:ASN75 3.8 2.1 1.0 OE2 A:GLU81 3.9 2.4 1.0 C A:ARG79 4.0 1.9 1.0 N A:GLU81 4.1 1.6 1.0 HG2 A:GLU81 4.1 2.2 1.0 HB3 A:ASN75 4.1 2.7 1.0 CA A:ASN75 4.1 2.1 1.0 HB2 A:GLU81 4.2 1.8 1.0 CG A:GLU84 4.4 1.5 1.0 H A:ARG79 4.4 2.3 1.0 CB A:GLU81 4.4 1.7 1.0 CA A:ILE80 4.4 1.6 1.0 HD13 A:ILE80 4.4 1.8 1.0 H A:GLU74 4.4 2.3 1.0 H A:LYS76 4.4 2.5 1.0 OE1 A:GLU81 4.5 2.2 1.0 HB3 A:ASP77 4.5 2.7 1.0 C A:ILE80 4.6 1.6 1.0 ND2 A:ASN75 4.6 3.3 1.0 HG3 A:GLU84 4.6 1.8 1.0 CB A:ASP77 4.6 2.6 1.0 C A:ASN75 4.7 2.4 1.0 HB2 A:GLU84 4.7 1.5 1.0 HA A:ASP73 4.7 1.6 1.0 HB2 A:GLU74 4.7 3.8 1.0 N A:ILE80 4.7 1.8 1.0 N A:ASP77 4.7 2.7 1.0 N A:LYS76 4.7 2.5 1.0 HB2 A:ARG79 4.8 2.3 1.0 N A:GLU74 4.8 2.2 1.0 CB A:ASP73 4.9 1.9 1.0 CA A:GLU81 4.9 1.6 1.0 HD11 A:ILE80 4.9 1.8 1.0 CB A:GLU84 5.0 1.3 1.0

Calcium binding site 2 out of 3 in the uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca601 b:1.4 occ:1.00 OD1 A:ASP111 2.5 1.8 1.0 O A:TYR115 2.5 1.6 1.0 OD2 A:ASP109 2.5 1.8 1.0 OE1 A:GLU120 2.7 1.7 1.0 OD2 A:ASP111 2.7 2.1 1.0 OE2 A:GLU120 2.8 1.7 1.0 OD1 A:ASP113 2.8 1.8 1.0 OD1 A:ASP109 2.9 1.5 1.0 CG A:ASP111 2.9 1.8 1.0 H A:ASP113 2.9 2.1 1.0 CG A:ASP109 3.0 1.3 1.0 CD A:GLU120 3.1 1.3 1.0 HA A:ILE116 3.5 1.5 1.0 CG A:ASP113 3.7 2.0 1.0 C A:TYR115 3.7 1.6 1.0 HA A:ASN112 3.8 2.1 1.0 N A:ASP113 3.9 1.9 1.0 N A:ASN112 4.0 1.7 1.0 H A:ASP111 4.0 1.5 1.0 H A:ASN112 4.0 1.7 1.0 H A:TYR115 4.0 2.0 1.0 HG21 A:THR117 4.1 1.9 1.0 C A:ASP111 4.2 1.7 1.0 CB A:ASP111 4.2 2.0 1.0 OD2 A:ASP113 4.3 2.4 1.0 CA A:ASN112 4.3 1.9 1.0 CA A:ILE116 4.4 1.4 1.0 HG12 A:ILE116 4.4 2.2 1.0 H A:THR117 4.5 1.4 1.0 N A:ILE116 4.5 1.6 1.0 CB A:ASP109 4.5 1.4 1.0 N A:ASP111 4.6 1.5 1.0 HB3 A:ASP113 4.6 2.1 1.0 CA A:ASP111 4.6 1.8 1.0 HB2 A:ASP111 4.6 2.4 1.0 C A:ASN112 4.6 1.9 1.0 CB A:ASP113 4.6 2.1 1.0 O A:ASP111 4.6 2.0 1.0 CG A:GLU120 4.6 1.4 1.0 N A:TYR115 4.7 1.9 1.0 CA A:TYR115 4.7 1.8 1.0 HB2 A:TYR115 4.8 1.9 1.0 HB3 A:TYR115 4.8 2.0 1.0 CA A:ASP113 4.8 2.1 1.0 H A:GLY114 4.9 2.1 1.0 HB3 A:ASP109 4.9 1.6 1.0 HB3 A:ASP111 5.0 2.3 1.0 HB2 A:ASP109 5.0 1.7 1.0

Calcium binding site 3 out of 3 in the uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of uc(Nmr) Structure of Calcium Loaded, Un-Myristoylated Human Ncs-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca602 b:1.7 occ:1.00 HB2 A:ASP161 2.5 3.1 1.0 OE1 A:GLU168 2.6 1.9 1.0 OD1 A:ASP157 2.6 2.2 1.0 HA A:ASP157 2.8 1.6 1.0 OD2 A:ASP161 2.8 2.6 1.0 OE2 A:GLU168 2.8 1.7 1.0 OD1 A:ASN159 2.8 1.9 1.0 O A:LYS163 2.9 1.9 1.0 CD A:GLU168 2.9 1.4 1.0 CG A:ASP157 3.2 2.1 1.0 HA A:LEU164 3.3 1.4 1.0 CB A:ASP161 3.3 2.9 1.0 CG A:ASP161 3.4 2.6 1.0 CA A:ASP157 3.7 1.6 1.0 HB3 A:ASP161 3.7 3.1 1.0 CB A:ASP157 3.8 1.8 1.0 HB2 A:ASP157 3.8 1.7 1.0 HD11 A:LEU164 3.8 2.0 1.0 H A:THR165 3.9 1.3 1.0 OD2 A:ASP157 4.0 2.4 1.0 H A:ASP161 4.0 2.6 1.0 CG A:ASN159 4.0 1.9 1.0 C A:LYS163 4.0 1.6 1.0 CG A:GLU168 4.2 1.4 1.0 H A:LYS163 4.3 2.2 1.0 HG3 A:GLU168 4.3 1.6 1.0 CA A:LEU164 4.3 1.3 1.0 O A:ASP157 4.4 2.1 1.0 HD12 A:LEU164 4.4 2.5 1.0 HD22 A:ASN159 4.4 2.3 1.0 C A:ASP157 4.5 1.8 1.0 HB2 A:GLU168 4.5 1.3 1.0 O A:MET156 4.6 1.6 1.0 CA A:ASP161 4.6 3.0 1.0 CD1 A:LEU164 4.6 1.9 1.0 OD1 A:ASP161 4.6 2.8 1.0 N A:ASP161 4.7 2.7 1.0 HG1 A:THR165 4.7 2.0 1.0 N A:LEU164 4.7 1.4 1.0 N A:THR165 4.7 1.3 1.0 ND2 A:ASN159 4.7 2.2 1.0 H A:GLY162 4.7 2.6 1.0 N A:ASP157 4.8 1.5 1.0 HB3 A:ASP157 4.9 2.1 1.0 HH22 A:ARG118 4.9 3.8 1.0 CB A:GLU168 4.9 1.3 1.0 HB3 A:ASN159 4.9 2.4 1.0 HG2 A:GLU168 5.0 1.6 1.0 N A:LYS163 5.0 2.1 1.0

P.O.Heidarsson, I.J.Bjerrum-Bohr, G.A.Jensen, O.Pongs, B.E.Finn, F.M.Poulsen, B.B.Kragelund. The C-Terminal Tail of Human Neuronal Calcium Sensor 1 Regulates the Conformational Stability of the Ca(2+)-Activated State. J.Mol.Biol. V. 417 51 2012.
ISSN: ISSN 0022-2836
PubMed: 22227393
DOI: 10.1016/J.JMB.2011.12.049