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Calcium in PDB 2lmu: Androcam at High Calcium

Calcium Binding Sites:

The binding sites of Calcium atom in the Androcam at High Calcium (pdb code 2lmu). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Androcam at High Calcium, PDB code: 2lmu:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2lmu

Go back to Calcium Binding Sites List in 2lmu
Calcium binding site 1 out of 2 in the Androcam at High Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Androcam at High Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca149

b:22.2
occ:1.00
HB2 A:ASP95 2.1 22.8 1.0
OD1 A:ASP93 2.3 20.0 1.0
O A:PHE99 2.3 21.1 1.0
OD1 A:ASP97 2.4 22.7 1.0
OE2 A:GLU104 2.5 22.6 1.0
OD2 A:ASP95 2.5 24.3 1.0
OE1 A:GLU104 2.5 22.7 1.0
CD A:GLU104 2.8 22.8 1.0
H A:ASP95 3.0 21.7 1.0
CB A:ASP95 3.0 23.3 1.0
HA A:ILE100 3.1 21.0 1.0
CG A:ASP95 3.1 23.9 1.0
CG A:ASP97 3.4 22.7 1.0
CG A:ASP93 3.5 19.6 1.0
C A:PHE99 3.6 20.6 1.0
N A:ASP95 3.7 22.1 1.0
CA A:ASP95 3.8 22.6 1.0
HB3 A:ASP95 3.8 23.9 1.0
OD2 A:ASP97 3.9 22.4 1.0
H A:PHE99 4.0 20.9 1.0
HA A:ASP93 4.0 19.8 1.0
CA A:ILE100 4.1 20.7 1.0
OD2 A:ASP93 4.1 19.9 1.0
H A:SER101 4.2 22.3 1.0
C A:ASP95 4.2 21.8 1.0
O A:ASP95 4.2 20.8 1.0
N A:ILE100 4.3 20.4 1.0
H A:ASP97 4.3 22.7 1.0
OD1 A:ASP95 4.3 24.0 1.0
CG A:GLU104 4.3 23.2 1.0
H A:GLY98 4.4 20.8 1.0
HE1 A:MET135 4.5 23.5 1.0
H A:ARG94 4.5 21.1 1.0
HE2 A:MET135 4.5 23.7 1.0
HG12 A:ILE100 4.5 18.9 1.0
N A:PHE99 4.6 20.4 1.0
N A:ARG94 4.7 20.9 1.0
CB A:ASP93 4.7 18.7 1.0
CA A:ASP93 4.7 19.2 1.0
CA A:PHE99 4.7 20.4 1.0
CB A:ASP97 4.7 23.4 1.0
HB3 A:ASP97 4.7 24.1 1.0
N A:SER101 4.7 22.4 1.0
HG22 A:ILE100 4.7 20.4 1.0
C A:ASP93 4.7 19.9 1.0
HA A:ASP95 4.8 23.1 1.0
HG3 A:GLU104 4.8 23.9 1.0
HG2 A:GLU104 4.8 23.5 1.0
C A:ILE100 4.8 21.6 1.0
C A:ARG94 4.9 22.1 1.0
HB2 A:PHE99 4.9 22.1 1.0
CE A:MET135 4.9 23.8 1.0
HE3 A:MET135 5.0 23.9 1.0
OG A:SER101 5.0 24.6 1.0
N A:ASP97 5.0 22.4 1.0

Calcium binding site 2 out of 2 in 2lmu

Go back to Calcium Binding Sites List in 2lmu
Calcium binding site 2 out of 2 in the Androcam at High Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Androcam at High Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca150

b:22.2
occ:1.00
OD1 A:ASP129 2.3 24.4 1.0
O A:MET135 2.3 21.6 1.0
OD1 A:ASP133 2.4 24.3 1.0
OE1 A:GLU140 2.5 20.5 1.0
OD1 A:ASP131 2.5 23.5 1.0
OE2 A:GLU140 2.5 20.8 1.0
CD A:GLU140 2.7 20.1 1.0
OD2 A:ASP131 3.1 22.5 1.0
CG A:ASP133 3.1 24.9 1.0
CG A:ASP131 3.1 23.3 1.0
OD2 A:ASP133 3.1 24.6 1.0
H A:MET135 3.4 23.8 1.0
C A:MET135 3.4 21.6 1.0
CG A:ASP129 3.4 23.8 1.0
HA A:ASP129 3.5 21.4 1.0
HB2 A:ASP129 3.8 22.5 1.0
HA A:ILE136 3.8 19.6 1.0
H A:GLY132 3.8 24.8 1.0
H A:ASP133 3.8 25.6 1.0
HB2 A:MET135 3.9 23.0 1.0
CG A:GLU140 4.0 18.8 1.0
CB A:ASP129 4.0 22.9 1.0
HG3 A:GLU140 4.1 18.5 1.0
N A:MET135 4.1 23.7 1.0
HD13 A:ILE136 4.1 19.7 1.0
CA A:MET135 4.2 22.7 1.0
CA A:ASP129 4.2 22.1 1.0
H A:PHE130 4.3 21.6 1.0
H A:ASP131 4.4 23.0 1.0
N A:ILE136 4.4 20.6 1.0
N A:ASP133 4.5 26.3 1.0
OD2 A:ASP129 4.5 24.0 1.0
CB A:ASP133 4.5 26.1 1.0
H A:ASN137 4.5 18.4 1.0
H A:GLY134 4.6 25.4 1.0
CA A:ILE136 4.6 19.5 1.0
HG2 A:GLU140 4.6 18.7 1.0
CB A:ASP131 4.6 24.2 1.0
CB A:MET135 4.6 23.0 1.0
N A:GLY132 4.7 25.6 1.0
N A:PHE130 4.8 22.4 1.0
N A:GLY134 4.9 25.7 1.0
C A:ASP129 4.9 22.8 1.0
N A:ASP131 4.9 23.8 1.0
CA A:ASP133 4.9 26.6 1.0
HD1 A:PHE99 5.0 21.1 1.0

Reference:

M.K.Joshi, S.Moran, K.M.Beckingham, K.R.Mackenzie. Structure of Androcam Supports Specialized Interactions with Myosin VI. Proc.Natl.Acad.Sci.Usa V. 109 13290 2012.
ISSN: ISSN 0027-8424
PubMed: 22851764
DOI: 10.1073/PNAS.1209730109
Page generated: Fri Jul 12 14:08:54 2024

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