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Calcium in PDB 2lux: Calcium Saturated Form of Human C85M S100A1 Mutant

Calcium Binding Sites:

The binding sites of Calcium atom in the Calcium Saturated Form of Human C85M S100A1 Mutant (pdb code 2lux). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Calcium Saturated Form of Human C85M S100A1 Mutant, PDB code: 2lux:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 2lux

Go back to Calcium Binding Sites List in 2lux
Calcium binding site 1 out of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:0.0
occ:1.00
OE1 A:GLU32 2.4 0.0 1.0
O A:GLU22 2.4 0.0 1.0
O A:LYS27 2.5 0.0 1.0
O A:SER19 2.5 0.0 1.0
O A:ASP24 2.6 0.0 1.0
HA A:LEU28 2.8 0.0 1.0
OG A:SER19 3.1 0.0 1.0
HG A:SER19 3.1 0.0 1.0
HA3 A:GLY23 3.2 0.0 1.0
HA A:SER19 3.2 0.0 1.0
CD A:GLU32 3.2 0.0 1.0
HD13 A:LEU28 3.3 0.0 1.0
OE2 A:GLU32 3.4 0.0 1.0
C A:SER19 3.4 0.0 1.0
C A:ASP24 3.6 0.0 1.0
C A:GLU22 3.6 0.0 1.0
C A:LYS27 3.6 0.0 1.0
C A:GLY23 3.6 0.0 1.0
N A:ASP24 3.7 0.0 1.0
CA A:SER19 3.7 0.0 1.0
H A:ASP24 3.7 0.0 1.0
H A:SER29 3.8 0.0 1.0
CA A:GLY23 3.8 0.0 1.0
CA A:LEU28 3.8 0.0 1.0
CB A:SER19 4.0 0.0 1.0
O A:GLY23 4.1 0.0 1.0
N A:LEU28 4.1 0.0 1.0
HA A:LYS25 4.2 0.0 1.0
N A:GLY23 4.2 0.0 1.0
CA A:ASP24 4.2 0.0 1.0
CD1 A:LEU28 4.3 0.0 1.0
H A:GLU22 4.5 0.0 1.0
HD12 A:LEU28 4.5 0.0 1.0
N A:LYS25 4.5 0.0 1.0
N A:SER29 4.6 0.0 1.0
HB2 A:LEU28 4.6 0.0 1.0
H A:LYS27 4.6 0.0 1.0
N A:GLY20 4.6 0.0 1.0
HB3 A:SER19 4.6 0.0 1.0
CG A:GLU32 4.7 0.0 1.0
HB2 A:ASP24 4.7 0.0 1.0
HB2 A:SER19 4.7 0.0 1.0
CB A:LEU28 4.7 0.0 1.0
C A:LEU28 4.7 0.0 1.0
CA A:LYS25 4.7 0.0 1.0
HA2 A:GLY20 4.8 0.0 1.0
HA2 A:GLY23 4.8 0.0 1.0
CA A:GLU22 4.8 0.0 1.0
CA A:LYS27 4.8 0.0 1.0
HB2 A:GLU32 4.8 0.0 1.0
HB3 A:GLU32 4.9 0.0 1.0
HB2 A:GLU22 4.9 0.0 1.0
N A:LYS27 4.9 0.0 1.0
N A:GLU22 5.0 0.0 1.0
C A:LYS25 5.0 0.0 1.0
O A:LYS25 5.0 0.0 1.0

Calcium binding site 2 out of 4 in 2lux

Go back to Calcium Binding Sites List in 2lux
Calcium binding site 2 out of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:0.0
occ:1.00
OD1 A:ASP62 2.2 0.0 1.0
OD2 A:ASP66 2.3 0.0 1.0
OE2 A:GLU73 2.4 0.0 1.0
OD1 A:ASN64 2.5 0.0 1.0
O A:GLU68 2.5 0.0 1.0
HB2 A:ASN64 2.8 0.0 1.0
CG A:ASP66 2.9 0.0 1.0
OD1 A:ASP66 2.9 0.0 1.0
OE1 A:GLU73 3.0 0.0 1.0
CG A:ASP62 3.0 0.0 1.0
CD A:GLU73 3.0 0.0 1.0
HA A:VAL69 3.3 0.0 1.0
CG A:ASN64 3.4 0.0 1.0
OD2 A:ASP62 3.4 0.0 1.0
CB A:ASN64 3.6 0.0 1.0
C A:GLU68 3.7 0.0 1.0
H A:ASN64 3.8 0.0 1.0
HA A:ASP62 3.9 0.0 1.0
CB A:ASP62 4.1 0.0 1.0
H A:GLU68 4.1 0.0 1.0
HB2 A:ASP62 4.1 0.0 1.0
H A:ASP66 4.2 0.0 1.0
HB3 A:ASN64 4.2 0.0 1.0
CA A:VAL69 4.3 0.0 1.0
CB A:ASP66 4.3 0.0 1.0
H A:ASP70 4.4 0.0 1.0
CG A:GLU73 4.4 0.0 1.0
HB2 A:GLU68 4.4 0.0 1.0
N A:VAL69 4.4 0.0 1.0
H A:GLY67 4.4 0.0 1.0
H A:GLY65 4.4 0.0 1.0
HB3 A:ASP66 4.5 0.0 1.0
CA A:ASP62 4.5 0.0 1.0
HG11 A:VAL69 4.5 0.0 1.0
N A:ASN64 4.6 0.0 1.0
HG3 A:GLU73 4.6 0.0 1.0
ND2 A:ASN64 4.6 0.0 1.0
N A:GLU68 4.6 0.0 1.0
CA A:GLU68 4.7 0.0 1.0
CA A:ASN64 4.7 0.0 1.0
H A:GLU63 4.7 0.0 1.0
N A:ASP70 4.9 0.0 1.0
N A:ASP66 4.9 0.0 1.0
HD22 A:ASN64 4.9 0.0 1.0
HG2 A:GLU73 5.0 0.0 1.0
HB2 A:ASP66 5.0 0.0 1.0
C A:VAL69 5.0 0.0 1.0
HB3 A:ASP62 5.0 0.0 1.0

Calcium binding site 3 out of 4 in 2lux

Go back to Calcium Binding Sites List in 2lux
Calcium binding site 3 out of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca101

b:0.0
occ:1.00
OE1 B:GLU32 2.4 0.0 1.0
O B:GLU22 2.4 0.0 1.0
O B:LYS27 2.5 0.0 1.0
O B:SER19 2.5 0.0 1.0
O B:ASP24 2.6 0.0 1.0
HA B:LEU28 2.8 0.0 1.0
OG B:SER19 3.1 0.0 1.0
HG B:SER19 3.1 0.0 1.0
HA3 B:GLY23 3.2 0.0 1.0
HA B:SER19 3.2 0.0 1.0
CD B:GLU32 3.2 0.0 1.0
HD13 B:LEU28 3.3 0.0 1.0
OE2 B:GLU32 3.4 0.0 1.0
C B:SER19 3.4 0.0 1.0
C B:ASP24 3.6 0.0 1.0
C B:GLU22 3.6 0.0 1.0
C B:LYS27 3.6 0.0 1.0
C B:GLY23 3.6 0.0 1.0
N B:ASP24 3.7 0.0 1.0
CA B:SER19 3.7 0.0 1.0
H B:ASP24 3.7 0.0 1.0
H B:SER29 3.8 0.0 1.0
CA B:GLY23 3.8 0.0 1.0
CA B:LEU28 3.8 0.0 1.0
CB B:SER19 4.0 0.0 1.0
O B:GLY23 4.1 0.0 1.0
N B:LEU28 4.1 0.0 1.0
HA B:LYS25 4.2 0.0 1.0
N B:GLY23 4.2 0.0 1.0
CA B:ASP24 4.2 0.0 1.0
CD1 B:LEU28 4.3 0.0 1.0
H B:GLU22 4.5 0.0 1.0
HD12 B:LEU28 4.5 0.0 1.0
N B:LYS25 4.5 0.0 1.0
N B:SER29 4.6 0.0 1.0
HB2 B:LEU28 4.6 0.0 1.0
H B:LYS27 4.6 0.0 1.0
N B:GLY20 4.6 0.0 1.0
HB3 B:SER19 4.6 0.0 1.0
CG B:GLU32 4.7 0.0 1.0
HB2 B:ASP24 4.7 0.0 1.0
HB2 B:SER19 4.7 0.0 1.0
CB B:LEU28 4.7 0.0 1.0
C B:LEU28 4.7 0.0 1.0
CA B:LYS25 4.7 0.0 1.0
HA2 B:GLY20 4.8 0.0 1.0
HA2 B:GLY23 4.8 0.0 1.0
CA B:GLU22 4.8 0.0 1.0
CA B:LYS27 4.8 0.0 1.0
HB2 B:GLU32 4.8 0.0 1.0
HB3 B:GLU32 4.9 0.0 1.0
HB2 B:GLU22 4.9 0.0 1.0
N B:LYS27 4.9 0.0 1.0
N B:GLU22 5.0 0.0 1.0
C B:LYS25 5.0 0.0 1.0
O B:LYS25 5.0 0.0 1.0

Calcium binding site 4 out of 4 in 2lux

Go back to Calcium Binding Sites List in 2lux
Calcium binding site 4 out of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca102

b:0.0
occ:1.00
OD1 B:ASP62 2.2 0.0 1.0
OD2 B:ASP66 2.3 0.0 1.0
OE2 B:GLU73 2.4 0.0 1.0
OD1 B:ASN64 2.5 0.0 1.0
O B:GLU68 2.5 0.0 1.0
HB2 B:ASN64 2.8 0.0 1.0
CG B:ASP66 2.9 0.0 1.0
OD1 B:ASP66 2.9 0.0 1.0
OE1 B:GLU73 3.0 0.0 1.0
CG B:ASP62 3.0 0.0 1.0
CD B:GLU73 3.0 0.0 1.0
HA B:VAL69 3.3 0.0 1.0
CG B:ASN64 3.4 0.0 1.0
OD2 B:ASP62 3.4 0.0 1.0
CB B:ASN64 3.6 0.0 1.0
C B:GLU68 3.7 0.0 1.0
H B:ASN64 3.8 0.0 1.0
HA B:ASP62 3.9 0.0 1.0
CB B:ASP62 4.1 0.0 1.0
H B:GLU68 4.1 0.0 1.0
HB2 B:ASP62 4.1 0.0 1.0
H B:ASP66 4.2 0.0 1.0
HB3 B:ASN64 4.2 0.0 1.0
CA B:VAL69 4.3 0.0 1.0
CB B:ASP66 4.3 0.0 1.0
H B:ASP70 4.4 0.0 1.0
HB2 B:GLU68 4.4 0.0 1.0
CG B:GLU73 4.4 0.0 1.0
N B:VAL69 4.4 0.0 1.0
H B:GLY67 4.4 0.0 1.0
H B:GLY65 4.4 0.0 1.0
HB3 B:ASP66 4.5 0.0 1.0
CA B:ASP62 4.5 0.0 1.0
HG11 B:VAL69 4.5 0.0 1.0
N B:ASN64 4.6 0.0 1.0
HG3 B:GLU73 4.6 0.0 1.0
ND2 B:ASN64 4.6 0.0 1.0
N B:GLU68 4.6 0.0 1.0
CA B:GLU68 4.7 0.0 1.0
CA B:ASN64 4.7 0.0 1.0
H B:GLU63 4.7 0.0 1.0
N B:ASP70 4.9 0.0 1.0
N B:ASP66 4.9 0.0 1.0
HD22 B:ASN64 4.9 0.0 1.0
HG2 B:GLU73 5.0 0.0 1.0
HB2 B:ASP66 5.0 0.0 1.0
C B:VAL69 5.0 0.0 1.0
HB3 B:ASP62 5.0 0.0 1.0

Reference:

K.Ruszczynska-Bartnik, A.Ejchart, M.Budzinska, K.Zdanowski. Solution Structure of Human Holo-S100A1 C85M Mutant To Be Published.
Page generated: Fri Jul 12 14:12:09 2024

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