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Calcium in PDB 3wgj: Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS

Protein crystallography data

The structure of Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS, PDB code: 3wgj was solved by T.Matsui, I.Tanaka, M.Yao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.49 / 2.18
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.955, 43.862, 86.488, 96.91, 102.34, 109.38
R / Rfree (%) 18.5 / 23.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS (pdb code 3wgj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS, PDB code: 3wgj:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 3wgj

Go back to Calcium Binding Sites List in 3wgj
Calcium binding site 1 out of 2 in the Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:37.1
occ:0.75
O A:HOH523 2.3 28.2 1.0
O A:THR203 2.3 33.7 1.0
O A:LEU200 2.3 26.3 1.0
O A:LEU209 2.5 21.3 1.0
OD1 A:ASN208 2.6 24.9 1.0
O A:HOH550 2.7 25.3 1.0
C A:THR203 3.2 31.4 1.0
C A:LEU200 3.5 29.9 1.0
CG A:ASN208 3.6 24.4 1.0
C A:LEU209 3.7 24.3 1.0
N A:PRO204 4.0 31.3 1.0
N A:THR203 4.0 27.3 1.0
ND2 A:ASN208 4.0 26.6 1.0
N A:LEU209 4.1 24.7 1.0
CA A:PRO204 4.1 32.4 1.0
CA A:THR203 4.1 34.3 1.0
CA A:LEU200 4.2 29.9 1.0
N A:GLY205 4.3 28.3 1.0
C A:PRO204 4.4 26.5 1.0
O A:ILE201 4.5 32.2 1.0
CA A:LEU209 4.5 25.2 1.0
N A:ILE201 4.5 29.7 1.0
C A:ILE201 4.6 28.6 1.0
N A:ASP210 4.7 25.6 1.0
CA A:ASP210 4.7 27.5 1.0
O A:HOH531 4.7 22.6 1.0
CB A:THR203 4.8 31.8 1.0
CA A:ILE201 4.8 29.9 1.0
CB A:ASN208 4.9 24.2 1.0
CB A:LEU200 4.9 30.0 1.0
C A:ALA202 4.9 34.9 1.0
CB A:ASP210 5.0 24.6 1.0
O A:ASP199 5.0 31.7 1.0

Calcium binding site 2 out of 2 in 3wgj

Go back to Calcium Binding Sites List in 3wgj
Calcium binding site 2 out of 2 in the Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca401

b:36.2
occ:0.68
O B:HOH537 2.3 30.9 1.0
O B:LEU200 2.3 29.6 1.0
O B:THR203 2.3 35.3 1.0
O B:LEU209 2.4 19.6 1.0
O B:HOH533 2.5 25.7 1.0
OD1 B:ASN208 2.6 29.7 1.0
C B:THR203 3.4 31.6 1.0
C B:LEU200 3.4 27.7 1.0
CG B:ASN208 3.5 26.9 1.0
C B:LEU209 3.6 22.2 1.0
ND2 B:ASN208 3.9 27.2 1.0
N B:LEU209 3.9 25.5 1.0
CA B:PRO204 4.1 33.4 1.0
N B:PRO204 4.2 34.8 1.0
CA B:LEU200 4.2 28.2 1.0
N B:THR203 4.3 29.9 1.0
CA B:THR203 4.3 34.1 1.0
CA B:LEU209 4.4 24.6 1.0
N B:GLY205 4.4 27.1 1.0
N B:ILE201 4.4 28.3 1.0
N B:ASP210 4.5 24.1 1.0
CA B:ASP210 4.6 23.7 1.0
O B:HOH524 4.6 19.8 1.0
C B:PRO204 4.6 29.8 1.0
O B:ILE201 4.6 33.1 1.0
C B:ILE201 4.6 30.8 1.0
CA B:ILE201 4.7 28.3 1.0
CB B:LEU209 4.8 21.4 1.0
CB B:ASN208 4.8 25.6 1.0
CB B:LEU200 4.8 28.2 1.0
CB B:THR203 4.9 34.2 1.0
CB B:ASP210 4.9 26.2 1.0
C B:ASN208 4.9 24.8 1.0
CA B:ASN208 5.0 27.2 1.0

Reference:

T.Matsui, X.Han, J.Yu, M.Yao, I.Tanaka. Structural Change in Ftsz Induced By Intermolecular Interactions Between Bound Gtp and the T7 Loop J.Biol.Chem. V. 289 3501 2014.
ISSN: ISSN 0021-9258
PubMed: 24347164
DOI: 10.1074/JBC.M113.514901
Page generated: Tue Jul 8 17:49:23 2025

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