Calcium in PDB, part 153 (files: 6081-6120),
PDB 3vyk-3whd
Experimental structures of coordination spheres of Calcium (Ca) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Calcium atoms. PDB files: 6081-6120 (PDB 3vyk-3whd).
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3vyk (Ca: 1) - Crystal Structure of C-Type Lectin Domain of Murine Dendritic Cell Inhibitory Receptor 2 in Complex with N-Glycan
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3vyv (Ca: 4) - Crystal Structure of Subtilisin Nat at 1.36
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3w09 (Ca: 1) - Influenza Virus Neuraminidase Subtype N9 (Tern) Complexed with 2,3-Dif Guanidino-NEU5AC2EN Inhibitor
Other atoms:
F (2);
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3w3d (Ca: 2) - Crystal Structure of Smooth Muscle G Actin Dnase I Complex
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3w57 (Ca: 6) - Structure of A C2 Domain
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3w5e (Ca: 2) - Crystal Structure of Phosphodiesterase 4B in Complex with Compound 31E
Other atoms:
Zn (2);
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3w5m (Ca: 1) - Crystal Structure of Streptomyces Avermitilis Alpha-L-Rhamnosidase
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3w5n (Ca: 1) - Crystal Structure of Streptomyces Avermitilis Alpha-L-Rhamnosidase Complexed with L-Rhamnose
Other atoms:
Na (3);
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3w6n (Ca: 1) - Crystal Structure of Human DLP1 in Complex with Gmp-Pn.Pi
Other atoms:
Mg (2);
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3w6o (Ca: 1) - Crystal Structure of Human DLP1 in Complex with Gmp-Pcp
Other atoms:
Mg (2);
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3w6p (Ca: 1) - Crystal Structure of Human DLP1 in Complex with Gdp.ALF4
Other atoms:
F (8);
Mg (2);
Al (2);
Na (2);
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3w7a (Ca: 3) - Crystal Structure of Azoreductase Azrc Fin Complex with Sulfone- Modified Azo Dye Acid Red 88
Other atoms:
K (4);
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3w7s (Ca: 2) - Escherichia Coli K12 Ygjk Complexed with Glucose
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3w7t (Ca: 2) - Escherichia Coli K12 Ygjk Complexed with Mannose
Other atoms:
Mg (2);
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3w7u (Ca: 2) - Escherichia Coli K12 Ygjk Complexed with Galactose
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3w7w (Ca: 2) - Crystal Structure of E. Coli Ygjk E727A Complexed with 2-O-Alpha-D- Glucopyranosyl-Alpha-D-Galactopyranose
Other atoms:
Mg (7);
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3w7x (Ca: 2) - Crystal Structure of E. Coli Ygjk D324N Complexed with Melibiose
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3w9t (Ca: 44) - Pore-Forming Cel-III
Other atoms:
Mg (14);
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3wa5 (Ca: 3) - Crystal Structure of Type VI Peptidoglycan Muramidase Effector TSE3 in Complex with Its Cognate Immunity Protein TSI3
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3wav (Ca: 1) - Crystal Structure of Autotaxin in Complex with Compound 10
Other atoms:
K (1);
Zn (2);
Cl (2);
Na (1);
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3waw (Ca: 1) - Crystal Structure of Autotaxin in Complex with 2BOA
Other atoms:
K (1);
Zn (2);
Cl (2);
Na (1);
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3wax (Ca: 1) - Crystal Structure of Autotaxin in Complex with 3BOA
Other atoms:
K (1);
Zn (2);
Cl (4);
Na (1);
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3way (Ca: 1) - Crystal Structure of Autotaxin in Complex with 4BOA
Other atoms:
K (1);
Zn (2);
Cl (4);
Na (1);
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3wc3 (Ca: 1) - Crystal Structure of Endo-1,4-Beta-Glucanase From Eisenia Fetida
Other atoms:
Na (1);
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3wcs (Ca: 2) - Crystal Structure of Plant Lectin (Ligand-Bound Form)
Other atoms:
Mn (2);
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3wct (Ca: 2) - The Structure of A Deoxygenated 400 kDa Hemoglobin Provides A More Accurate Description of the Cooperative Mechanism of Giant Hemoglobins: Oxygenated Form
Other atoms:
Fe (8);
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3wcu (Ca: 2) - The Structure of A Deoxygenated 400 kDa Hemoglobin Provides A More Accurate Description of the Cooperative Mechanism of Giant Hemoglobins: Deoxygenated Form
Other atoms:
Fe (8);
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3wcv (Ca: 6) - The Structure of A Deoxygenated 400 kDa Hemoglobin Provides A More Accurate Description of the Cooperative Mechanism of Giant Hemoglobins: Ca Bound Form
Other atoms:
Fe (8);
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3wd9 (Ca: 2) - Crystal Structure of Phosphodiesterase 4B in Complex with Compound 10F
Other atoms:
Zn (2);
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3wdh (Ca: 1) - Crystal Structure of Pullulanase From Anoxybacillus Sp. LM18-11
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3wdi (Ca: 1) - Crystal Structure of Pullulanase Complexed with Maltotriose From Anoxybacillus Sp. LM18-11
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3wdj (Ca: 1) - Crystal Structure of Pullulanase Complexed with Maltotetraose From Anoxybacillus Sp. LM18-11
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3wfb (Ca: 1) - Reduced Cytochrome C-Dependent Nitric Oxide Reductase (Cnor) From Pseudomonas Aeruginosa in Complex with Antibody Fragment
Other atoms:
Fe (4);
Cl (1);
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3wfc (Ca: 1) - Reduced and Carbonmonoxide-Bound Cytochrome C-Dependent Nitric Oxide Reductase (Cnor) From Pseudomonas Aeruginosa in Complex with Antibody Fragment
Other atoms:
Fe (4);
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3wfd (Ca: 1) - Reduced and Acetaldoxime-Bound Cytochrome C-Dependent Nitric Oxide Reductase (Cnor) From Pseudomonas Aeruginosa in Complex with Antibody Fragment
Other atoms:
Fe (4);
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3wfe (Ca: 1) - Reduced and Cyanide-Bound Cytochrome C-Dependent Nitric Oxide Reductase (Cnor) From Pseudomonas Aeruginosa in Complex with Antibody Fragment
Other atoms:
Fe (4);
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3wgj (Ca: 2) - Staphylococcus Aureus Ftsz T7 Chimera Mutant, T7BS
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3wh2 (Ca: 2) - Human Mincle in Complex with Citrate
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3wh3 (Ca: 2) - Human Mincle, Ligand Free Form
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3whd (Ca: 2) - C-Type Lectin, Human Mcl
Page generated: Tue Jul 8 22:15:39 2025
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