Calcium in PDB 8dh6: Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs

Enzymatic activity of Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs

Other elements in 8dh6:

Calcium Binding Sites:

Calcium binding site 1 out of 1 in 8dh6

Calcium Binding Sites List in 8dh6

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ a:Ca601 b:61.2 occ:1.00 O a:ALA42 2.4 58.9 1.0 O a:GLU39 2.4 57.7 1.0 O a:GLY44 2.5 61.8 1.0 OE1 a:GLU39 2.6 57.7 1.0 C a:GLU39 3.6 57.7 1.0 C a:ALA42 3.6 58.9 1.0 C a:GLY44 3.6 61.8 1.0 CD a:GLU39 3.8 57.7 1.0 CG a:GLN46 3.9 63.5 1.0 N a:GLY44 3.9 61.8 1.0 O a:PRO441 4.1 57.5 1.0 C a:PRO43 4.1 60.1 1.0 CA a:PRO43 4.3 60.1 1.0 N a:ALA42 4.3 58.9 1.0 CA a:LEU40 4.3 54.9 1.0 N a:GLN46 4.3 63.5 1.0 N a:LEU40 4.4 54.9 1.0 CA a:GLY44 4.4 61.8 1.0 N a:PRO43 4.4 60.1 1.0 CG a:GLU39 4.5 57.7 1.0 CB a:GLN46 4.5 63.5 1.0 N a:SER45 4.6 63.7 1.0 CA a:ALA42 4.6 58.9 1.0 CA a:GLU39 4.6 57.7 1.0 N a:ALA41 4.7 55.3 1.0 C a:LEU40 4.7 54.9 1.0 OE2 a:GLU39 4.7 57.7 1.0 CA a:SER45 4.7 63.7 1.0 O a:PRO43 4.7 60.1 1.0 OD2 a:ASP442 5.0 59.7 1.0

Reference: