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Calcium in PDB 8djf: Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate
Enzymatic activity of Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate
All present enzymatic activity of Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate:
3.1.1.17;
3.1.1.17;
Protein crystallography data
The structure of Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate, PDB code: 8djf
was solved by
C.A.Bingman,
B.W.Hall,
R.W.Smith,
B.G.Fox,
T.J.Donohue,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 38.03 / 1.55 |
| Space group | P 32 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 47.51, 47.51, 199.02, 90, 90, 120 |
| R / Rfree (%) | 17.8 / 21.2 |
Other elements in 8djf:
The structure of Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate also contains other interesting chemical elements:
| Sodium | (Na) | 1 atom |
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate
(pdb code 8djf). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate, PDB code: 8djf:
In total only one binding site of Calcium was determined in the Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate, PDB code: 8djf:
Calcium binding site 1 out of 1 in 8djf
Go back to
Calcium Binding Sites List in 8djf
Calcium binding site 1 out
of 1 in the Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate within 5.0Å range:
|
Reference:
B.W.Hall,
C.A.Bingman,
B.G.Fox,
D.R.Noguera,
T.J.Donohue.
A Broad Specificity Beta-Propeller Enzyme From Rhodopseudomonas Palustris That Hydrolyzes Many Lactones Including Gamma-Valerolactone. J.Biol.Chem. 02782 2022.
ISSN: ESSN 1083-351X
PubMed: 36502920
DOI: 10.1016/J.JBC.2022.102782
Page generated: Thu Jul 10 03:57:26 2025
ISSN: ESSN 1083-351X
PubMed: 36502920
DOI: 10.1016/J.JBC.2022.102782
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