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Calcium in PDB 9f1x: Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase.

Protein crystallography data

The structure of Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase., PDB code: 9f1x was solved by S.Kapetanaki, N.Coquelle, M.Weik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.75 / 1.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 101.51, 53.93, 72.05, 90, 90, 90
R / Rfree (%) 18.4 / 21.2

Calcium Binding Sites:

The binding sites of Calcium atom in the Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase. (pdb code 9f1x). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase., PDB code: 9f1x:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 9f1x

Go back to Calcium Binding Sites List in 9f1x
Calcium binding site 1 out of 2 in the Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:32.8
occ:1.00
OD1 A:ASP321 2.3 32.4 1.0
OD2 A:ASP310 2.4 32.5 1.0
O A:HOH580 2.4 32.4 1.0
O A:HOH564 2.4 32.0 1.0
OD1 A:ASP310 2.5 30.6 1.0
CG A:ASP310 2.8 31.6 1.0
CG A:ASP321 3.3 37.7 1.0
OD2 A:ASP321 3.7 38.6 1.0
CB A:ASP310 4.3 29.9 1.0
CB A:ASP321 4.6 29.5 1.0
O A:HOH515 4.6 31.4 1.0
N A:ASP321 4.7 28.3 1.0
CA A:ASP321 4.7 27.6 1.0
NE1 A:TRP307 4.7 32.1 1.0
OG A:SER319 5.0 32.7 1.0
O A:SER319 5.0 42.1 1.0
CZ2 A:TRP307 5.0 35.3 1.0

Calcium binding site 2 out of 2 in 9f1x

Go back to Calcium Binding Sites List in 9f1x
Calcium binding site 2 out of 2 in the Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:50.6
occ:1.00
OD2 A:ASP200 2.4 31.4 1.0
O A:HOH552 2.4 37.7 1.0
OD2 A:ASP156 2.7 40.3 1.0
O A:HOH516 2.7 35.0 1.0
CG A:ASP200 3.2 38.1 1.0
OD1 A:ASP200 3.2 33.7 1.0
O A:ILE157 3.4 31.2 1.0
CG A:ASP156 3.5 33.7 1.0
CB A:ASP156 3.6 30.0 1.0
OE1 A:GLU279 3.6 26.8 0.6
NH2 A:ARG283 3.7 38.1 1.0
OE2 A:GLU279 4.0 29.2 0.6
CD A:GLU279 4.1 35.5 0.6
N A:ILE157 4.2 28.1 1.0
C A:ILE157 4.4 30.9 1.0
CB A:ASP200 4.6 32.5 1.0
OD1 A:ASP156 4.7 42.2 1.0
CB A:PHE160 4.7 33.2 1.0
CA A:ASP156 4.7 26.0 1.0
OE2 A:GLU279 4.7 41.0 0.4
CG A:GLU279 4.8 35.4 0.4
C A:ASP156 4.9 28.1 1.0
CA A:ILE157 4.9 29.2 1.0
CZ A:ARG283 4.9 47.2 1.0

Reference:

S.Kapetanaki, N.Coquelle, M.Weik. Ssx Room Temperature Structure of Oscillatoria Acuminata Adenylyate Cyclase. To Be Published.
Page generated: Thu Jul 10 09:37:34 2025

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