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Calcium in PDB, part 374 (files: 14921-14960), PDB 9e9z-9ew5

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 14921-14960 (PDB 9e9z-9ew5).
  1. 9e9z (Ca: 8) - Sinv-Weev Fleming in Complex with Vldlr La(1-2)
  2. 9ea6 (Ca: 1) - T4 Bacteriophage Replicative Polymerase Captured in Polymerase Exchange State 3
  3. 9eaa (Ca: 1) - Seneca Valley Virus Altered Particle at Acidic Condition (A- Particle[C])
  4. 9eab (Ca: 1) - Seneca Valley Virus Altered Particle at Physiological Condition (A- Particle[P])
  5. 9eac (Ca: 1) - Seneca Valley Virus Empty Rotated Particle at Acidic Condition (Er- Particle[C])
  6. 9ead (Ca: 1) - Seneca Valley Virus Empty Rotated Particle at Physiological Condition (Er-Particle[P])
  7. 9eao (Ca: 3) - Murine Norovirus Allosteric V339I Escape Mutant + Calcium
  8. 9eau (Ca: 2) - Rrv Dkta Vlp in Complex with Vldlr-Lbd-Fc
  9. 9eb7 (Ca: 3) - Crystal Structure of Biotin Carboxylase From Ankistrodesmus
    Other atoms: Mg (1);
  10. 9ed1 (Ca: 12) - Cryo-Em Structure of the Human KCA3.1/Calmodulin Channel in Complex with CA2+ and 1,4-Dihydropyridine (Dhp-103)
    Other atoms: K (5);
  11. 9ef2 (Ca: 3) - Cryo-Em Structure of ALPHA5BETA1 Integrin in Complex with Neonectin Candidate 2, Open Conformation
    Other atoms: Mn (3);
  12. 9efz (Ca: 5) - Chicken BEST1 Bound to Gaba in An Open State
    Other atoms: Cl (5);
  13. 9egm (Ca: 5) - Human BEST1 Bound to Gaba in An Open State
    Other atoms: Cl (5);
  14. 9egq (Ca: 5) - Human BEST1 Bound to Gaba in An Intermediate State
  15. 9egs (Ca: 5) - Human BEST1 in An Inactivated State
    Other atoms: Cl (10);
  16. 9egt (Ca: 5) - Human BEST1 in An Open State
  17. 9eh5 (Ca: 8) - Structure of A Mutated Photosystem II Complex Reveals Changes to the Hydrogen-Bonding Network That Affect Proton Egress During O-O Bond Formation
    Other atoms: Cl (4); Mg (70); Fe (6); Mn (8);
  18. 9eio (Ca: 8) - Cryo-Em Structure of the Mutant KCA2.2_F244S Channel
    Other atoms: K (4);
  19. 9eit (Ca: 4) - Ncs.1 Fab in Complex with N5 Na of A/Shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
  20. 9eje (Ca: 4) - Ncs.1 Fab in Complex with N5 Na of A/Shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
  21. 9ejf (Ca: 8) - Ncs.1.1 Fab in Complex with the Snap of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
  22. 9ek6 (Ca: 1) - Crystal Structure of Mait Tcr in Complex with MR1-5FU
    Other atoms: Na (1);
  23. 9el6 (Ca: 6) - Crystal Structure of the KV7.1 C-Terminal Domain in Complex with Calmodulin Disease Mutation F90L
  24. 9en2 (Ca: 2) - Crystal Structure of the Metalloproteinase Enhancer Pcpe-1 Complexed with Nanobodies Vhh-H4 and Vhh-I5
  25. 9enp (Ca: 2) - Hsv-1 Dna Polymerase-Processivity Factor Complex in Exonuclease State with 1-Bp Dna Mismatch
  26. 9enq (Ca: 2) - Hsv-1 Dna Polymerase-Processivity Factor Complex in Exonuclease State Active Site with 1-Bp Dna Mismatch
  27. 9ent (Ca: 1) - Ssx Structure of Autotaxin in Cryogenic Conditions
    Other atoms: Zn (2); I (15); Na (3);
  28. 9erz (Ca: 2) - Structure of Cbl-Tkbd Bound to Ubiquitin-Fused Cblock Peptide
  29. 9est (Ca: 1) - Structural Study of Porcine Pancreatic Elastase Complexed with 7- Amino-3-(2-Bromoethoxy)-4-Chloroisocoumarin As A Nonreactivatable Doubly Covalent Enzyme-Inhibitor Complex
    Other atoms: Br (1);
  30. 9etj (Ca: 7) - Mouse Cnpase Catalytic Domain with Nanobody 10E
  31. 9etn (Ca: 6) - Crystal Structure of Murine CRTAC1
    Other atoms: Na (1); K (3);
  32. 9etz (Ca: 1) - III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae
    Other atoms: Cu (3); Mg (1); Zn (1); Fe (12);
  33. 9eu5 (Ca: 1) - Ssx Structure of Autotaxin at Room Temperature
    Other atoms: I (15); Na (2); Zn (9);
  34. 9ev8 (Ca: 10) - Non-Uniform Refinement of the Cryoem Structure of Declic Nanodisc with 10MM Calcium
  35. 9evc (Ca: 1) - Cryoem Structure of LMCA1 in E1-Ca State
  36. 9evj (Ca: 2) - Crystal Structure of Human Collagen Hydroxylysine Galactosyltransferase GLT25D1/COLGALT1: Complex with MN2+ and Udp-Gal
    Other atoms: Na (1); Cl (6); Mn (1);
  37. 9evk (Ca: 2) - Crystal Structure of Human Collagen Hydroxylysine Galactosyltransferase GLT25D1/COLGALT1
    Other atoms: Na (1); Cl (6);
  38. 9evl (Ca: 2) - Crystal Structure of Human Collagen Hydroxylysine Galactosyltransferase GLT25D1/COLGALT1: HG2+ Soak For Experimental Phasing
    Other atoms: Cl (7); Hg (9);
  39. 9ew3 (Ca: 1) - Ternary Structure of 14-3-3S, C-Raf Phosphopeptide 12-Mer (PS259) and Compound 78 (1084378)
    Other atoms: Br (1); Mg (3); Cl (1);
  40. 9ew5 (Ca: 3) - Ternary Structure of 14-3-3S, C-Raf Phosphopeptide (PS259) 12MER and Compound 23 (1083848)
    Other atoms: I (2); Mg (1);
Page generated: Mon Dec 15 09:34:38 2025

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