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Calcium in PDB 1scv: uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I

Calcium Binding Sites:

The binding sites of Calcium atom in the uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I (pdb code 1scv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I, PDB code: 1scv:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 1scv

Go back to Calcium Binding Sites List in 1scv
Calcium binding site 1 out of 2 in the uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca162

b:0.0
occ:1.00
OD1 A:ASP109 2.1 0.0 1.0
OE1 A:GLU116 2.1 0.0 1.0
O A:TYR111 2.2 0.0 1.0
OD1 A:ASP105 2.3 0.0 1.0
OE2 A:GLU116 2.5 0.0 1.0
CD A:GLU116 2.6 0.0 1.0
CG A:ASP105 2.8 0.0 1.0
HA A:ILE112 2.8 0.0 1.0
OD2 A:ASP105 2.9 0.0 1.0
HG13 A:ILE112 3.1 0.0 1.0
OD1 A:ASN107 3.2 0.0 1.0
CG A:ASP109 3.2 0.0 1.0
C A:TYR111 3.3 0.0 1.0
H A:ASP109 3.4 0.0 1.0
HG12 A:ILE112 3.4 0.0 1.0
H A:LYS106 3.5 0.0 1.0
HA A:ASP105 3.5 0.0 1.0
CG1 A:ILE112 3.7 0.0 1.0
CA A:ILE112 3.7 0.0 1.0
OD2 A:ASP109 3.7 0.0 1.0
HG23 A:ILE112 3.7 0.0 1.0
H A:ASN107 3.7 0.0 1.0
H A:TYR111 3.8 0.0 1.0
N A:ILE112 3.9 0.0 1.0
H A:ALA108 4.0 0.0 1.0
HD22 A:ASN107 4.0 0.0 1.0
CG A:GLU116 4.0 0.0 1.0
CB A:ASP105 4.1 0.0 1.0
CB A:ILE112 4.1 0.0 1.0
CG A:ASN107 4.1 0.0 1.0
CA A:ASP105 4.3 0.0 1.0
N A:ASP109 4.3 0.0 1.0
N A:LYS106 4.3 0.0 1.0
HB3 A:GLU116 4.4 0.0 1.0
N A:TYR111 4.4 0.0 1.0
CG2 A:ILE112 4.5 0.0 1.0
HB2 A:GLU116 4.5 0.0 1.0
ND2 A:ASN107 4.5 0.0 1.0
CA A:TYR111 4.5 0.0 1.0
CB A:ASP109 4.5 0.0 1.0
H A:GLY110 4.5 0.0 1.0
HG2 A:GLU116 4.6 0.0 1.0
CB A:GLU116 4.6 0.0 1.0
H A:ASP113 4.6 0.0 1.0
HG3 A:GLU116 4.6 0.0 1.0
N A:ALA108 4.6 0.0 1.0
HB3 A:ASP105 4.6 0.0 1.0
HB3 A:ASP109 4.7 0.0 1.0
N A:ASN107 4.7 0.0 1.0
HB2 A:ASP105 4.8 0.0 1.0
HA A:ALA108 4.8 0.0 1.0
C A:ASP105 4.9 0.0 1.0
H A:ILE112 4.9 0.0 1.0
CA A:ASP109 4.9 0.0 1.0
HB2 A:LYS106 4.9 0.0 1.0
C A:ILE112 4.9 0.0 1.0

Calcium binding site 2 out of 2 in 1scv

Go back to Calcium Binding Sites List in 1scv
Calcium binding site 2 out of 2 in the uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Structure of the C Terminal Domain of Cardiac Troponin C Bound to the N Terminal Domain of Cardiac Troponin I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca163

b:0.0
occ:1.00
HB3 A:ASN143 1.7 0.0 1.0
OD1 A:ASP145 1.8 0.0 1.0
OE2 A:GLU152 2.0 0.0 1.0
CG A:ASP145 2.2 0.0 1.0
OD2 A:ASP145 2.4 0.0 1.0
CD A:GLU152 2.5 0.0 1.0
CB A:ASN143 2.7 0.0 1.0
OE1 A:GLU152 2.7 0.0 1.0
HB2 A:ASN143 3.0 0.0 1.0
H A:ASP145 3.0 0.0 1.0
H A:ASN143 3.0 0.0 1.0
H A:ARG147 3.4 0.0 1.0
CB A:ASP145 3.4 0.0 1.0
HB3 A:ASP145 3.5 0.0 1.0
CG A:ASN143 3.6 0.0 1.0
CA A:ASN143 3.6 0.0 1.0
OD1 A:ASN143 3.6 0.0 1.0
O A:ARG147 3.6 0.0 1.0
N A:ASN143 3.7 0.0 1.0
CG A:GLU152 3.8 0.0 1.0
OD1 A:ASP141 3.8 0.0 1.0
N A:ASP145 3.8 0.0 1.0
H A:GLY146 3.9 0.0 1.0
HG2 A:GLU152 3.9 0.0 1.0
HB2 A:ARG147 4.0 0.0 1.0
C A:ASN143 4.0 0.0 1.0
H A:ASN144 4.1 0.0 1.0
C A:ARG147 4.2 0.0 1.0
H A:LYS142 4.2 0.0 1.0
CA A:ASP145 4.2 0.0 1.0
HB2 A:ASP145 4.2 0.0 1.0
HG3 A:GLU152 4.2 0.0 1.0
N A:ARG147 4.3 0.0 1.0
N A:ASN144 4.3 0.0 1.0
HA A:ILE148 4.4 0.0 1.0
N A:GLY146 4.5 0.0 1.0
OD1 A:ASP149 4.5 0.0 1.0
HA A:ASN143 4.6 0.0 1.0
CA A:ARG147 4.6 0.0 1.0
HA A:ASP141 4.6 0.0 1.0
O A:ASN143 4.6 0.0 1.0
C A:ASP145 4.7 0.0 1.0
CB A:ARG147 4.8 0.0 1.0
ND2 A:ASN143 4.8 0.0 1.0
N A:LYS142 4.9 0.0 1.0
N A:ILE148 4.9 0.0 1.0
C A:LYS142 5.0 0.0 1.0
CG A:ASP141 5.0 0.0 1.0
C A:ASN144 5.0 0.0 1.0

Reference:

N.L.Finley, J.W.Howarth, P.R.Rosevear. Structure of the MG2+-Loaded C-Lobe of Cardiac Troponin C Bound to the N-Domain of Cardiac Troponin I: Comparison with the CA2+-Loaded Structure. Biochemistry V. 43 11371 2004.
ISSN: ISSN 0006-2960
PubMed: 15350124
DOI: 10.1021/BI049672I
Page generated: Sat Dec 12 03:19:16 2020

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