Calcium in PDB 6twy: MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide

The structure of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide, PDB code: 6twy was solved by G.Gogl, A.Cousido-Siah, G.Trave, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.19 / 2.30
Space group	P 2 21 21
Cell size a, b, c (Å), α, β, γ (°)	61.450, 96.380, 198.450, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 25

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 11;

Binding sites:

The binding sites of Calcium atom in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide (pdb code 6twy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 11 binding sites of Calcium where determined in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide, PDB code: 6twy:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca904 b:0.1 occ:1.00 O A:LYS627 2.8 83.1 1.0 OE2 A:GLU635 3.0 83.2 1.0 O A:LEU630 3.2 80.2 1.0 CD A:GLU635 3.8 69.1 1.0 OE1 A:GLU635 3.9 86.5 1.0 C A:LYS627 4.0 80.9 1.0 C A:LEU630 4.4 73.4 1.0 CG A:LYS627 4.5 86.7 1.0 CA A:SER631 4.7 76.6 1.0 CA A:SER628 4.8 77.6 1.0 N A:SER628 4.8 76.9 1.0 CD A:LYS627 4.8 93.4 1.0 CA A:LYS627 4.8 77.4 1.0 CB A:SER631 4.9 91.5 1.0

Calcium binding site 2 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca905 b:0.8 occ:1.00 O A:GLY659 2.4 0.3 1.0 OD2 A:ASP701 2.6 0.4 1.0 O A:MET657 2.7 81.0 1.0 C A:MET657 3.2 74.5 1.0 C A:GLY659 3.4 0.1 1.0 CG2 A:THR662 3.4 75.8 1.0 CG A:ASP701 3.4 0.7 1.0 O A:LYS658 3.4 0.2 1.0 O A:GLY661 3.5 0.9 1.0 O A:LEU660 3.5 0.4 1.0 C A:GLY661 3.7 0.8 1.0 C A:LEU660 3.7 0.6 1.0 CA A:MET657 3.7 71.8 1.0 C A:LYS658 3.7 0.5 1.0 N A:THR662 3.9 94.0 1.0 CB A:THR662 3.9 85.0 1.0 CA A:THR662 3.9 78.8 1.0 OD1 A:ASP701 4.0 0.4 1.0 N A:LYS658 4.1 80.2 1.0 N A:GLY661 4.1 0.5 1.0 CA A:LEU660 4.2 0.8 1.0 N A:LEU660 4.2 0.2 1.0 N A:GLY659 4.2 0.8 1.0 CB A:ASP701 4.3 87.1 1.0 CA A:GLY659 4.3 0.4 1.0 CA A:LYS658 4.4 94.2 1.0 CA A:GLY661 4.4 0.4 1.0 CB A:MET657 4.4 63.5 1.0 O A:SER656 4.8 68.4 1.0 N A:MET657 4.9 70.0 1.0

Calcium binding site 3 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca906 b:0.2 occ:1.00 O A:VAL590 2.6 90.7 1.0 O A:GLY589 2.8 81.9 1.0 CG A:GLU592 3.6 87.2 1.0 C A:VAL590 3.8 89.3 1.0 C A:GLY589 3.9 78.8 1.0 CD A:GLU592 4.1 0.1 1.0 OE2 A:GLU592 4.1 0.6 1.0 CA A:VAL590 4.5 83.2 1.0 CB A:VAL590 4.6 80.4 1.0 N A:VAL590 4.6 78.9 1.0 N A:GLU592 4.6 73.0 1.0 N A:ASP591 4.8 84.1 1.0 CB A:GLU592 4.9 70.1 1.0 CA A:GLY589 4.9 78.5 1.0 OE1 A:GLU592 5.0 0.1 1.0

Calcium binding site 4 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca907 b:0.9 occ:1.00 O A:HOH1054 2.4 81.9 1.0 O A:HOH1001 2.7 75.9 1.0 OE1 A:GLU786 3.5 76.4 1.0 OE2 A:GLU786 3.6 68.0 1.0 O A:ARG744 3.9 73.2 1.0 CD A:GLU786 3.9 69.0 1.0 N A:GLY746 3.9 62.9 1.0 NZ A:LYS785 4.0 0.0 1.0 NZ A:LYS745 4.1 0.6 1.0 O A:GLY746 4.4 65.6 1.0 CD A:LYS745 4.4 0.4 1.0 CA A:LYS745 4.5 75.5 1.0 CA A:GLY746 4.6 71.0 1.0 C A:LYS745 4.7 69.3 1.0 CE A:LYS745 4.7 0.9 1.0 C A:GLY746 4.7 72.6 1.0 O A:GLY741 4.9 79.3 1.0 O A:LYS785 4.9 66.6 1.0 C A:ARG744 4.9 68.2 1.0

Calcium binding site 5 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca908 b:87.6 occ:1.00 O A:GLY821 2.4 74.6 1.0 O A:GLY819 2.4 59.6 1.0 O A:MET817 2.6 50.8 1.0 OD2 A:ASP861 2.6 70.0 1.0 OD1 A:ASP861 2.7 68.6 1.0 CG A:ASP861 3.0 68.3 1.0 C A:GLY821 3.5 62.1 1.0 C A:MET817 3.5 53.4 1.0 C A:GLY819 3.6 61.8 1.0 N A:GLY821 3.8 64.8 1.0 CA A:MET817 4.0 54.9 1.0 CA A:GLY821 4.1 52.8 1.0 N A:GLY819 4.2 55.7 1.0 C A:LYS820 4.2 64.9 1.0 C A:LYS818 4.4 54.8 1.0 O A:HOH1008 4.4 63.1 1.0 CA A:GLY819 4.5 52.8 1.0 OG1 A:THR822 4.5 56.0 1.0 CB A:ASP861 4.5 61.3 1.0 N A:LYS820 4.5 66.0 1.0 N A:LYS818 4.5 52.0 1.0 N A:THR822 4.6 60.0 1.0 CB A:MET817 4.6 59.8 1.0 CA A:LYS820 4.6 58.2 1.0 O A:HOH1003 4.6 73.6 1.0 O A:LYS820 4.7 60.9 1.0 O A:LYS818 4.7 60.8 1.0 CA A:THR822 4.9 52.8 1.0 CA A:LYS818 5.0 54.9 1.0

Calcium binding site 6 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca904 b:0.8 occ:1.00 O B:HOH1040 2.3 66.1 1.0 O B:HOH1001 3.8 78.1 1.0 OG B:SER760 3.9 70.2 1.0 ND1 B:HIS763 4.2 47.1 1.0 CB B:HIS763 4.3 45.0 1.0 CG B:HIS763 4.4 50.8 1.0 N B:GLY722 4.6 0.9 1.0 CA B:GLY722 4.7 0.1 1.0 CB B:SER760 4.8 62.8 1.0 CD2 B:LEU729 4.8 50.5 1.0 N B:SER760 4.9 54.9 1.0 CE1 B:HIS763 5.0 49.8 1.0

Calcium binding site 7 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca905 b:0.8 occ:1.00 O B:VAL590 2.7 88.5 1.0 O B:GLY589 2.7 99.2 1.0 OE2 B:GLU592 3.4 0.4 1.0 C B:GLY589 3.6 95.8 1.0 CG B:GLU592 3.8 0.5 1.0 C B:VAL590 3.9 89.1 1.0 CD B:GLU592 4.1 0.1 1.0 CA B:GLY589 4.4 91.9 1.0 N B:VAL590 4.4 92.4 1.0 CA B:VAL590 4.6 86.5 1.0 N B:GLU592 4.8 87.4 1.0 CB B:VAL590 4.8 82.0 1.0 N B:ASP591 4.9 84.7 1.0

Calcium binding site 8 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca906 b:0.4 occ:1.00 OE2 B:GLU635 2.9 91.6 1.0 OE1 B:GLU635 3.3 96.8 1.0 CD B:GLU635 3.5 87.5 1.0 O B:LYS627 3.6 86.3 1.0 CG B:LYS627 4.2 88.0 1.0 O B:LEU630 4.4 79.7 1.0 C B:LYS627 4.6 84.8 1.0 CD B:LYS627 4.8 91.1 1.0 CG B:GLU635 5.0 73.7 1.0

Calcium binding site 9 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca907 b:0.8 occ:1.00 OD2 B:ASP701 2.3 0.0 1.0 O B:GLY659 2.5 0.3 1.0 OD1 B:ASP701 2.9 0.4 1.0 CG B:ASP701 2.9 0.8 1.0 O B:MET657 3.4 95.8 1.0 C B:GLY659 3.5 0.1 1.0 O B:LEU660 4.2 0.6 1.0 N B:GLY659 4.3 0.6 1.0 C B:MET657 4.3 0.5 1.0 N B:LEU660 4.3 0.9 1.0 CA B:LEU660 4.3 0.9 1.0 CB B:ASP701 4.4 0.6 1.0 CA B:GLY659 4.4 0.5 1.0 C B:LEU660 4.6 0.6 1.0 CG2 B:THR662 4.9 98.5 1.0 C B:LYS658 4.9 0.4 1.0 CA B:MET657 4.9 86.9 1.0 CB B:MET657 4.9 70.0 1.0 CA B:ASP701 5.0 91.1 1.0

Calcium binding site 10 out of 11 in the MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca908 b:0.2 occ:1.00 N B:GLY746 3.3 72.6 1.0 CD B:LYS745 3.6 0.3 1.0 OE1 B:GLU786 3.6 72.2 1.0 OE2 B:GLU786 3.7 83.3 1.0 O B:ARG744 3.7 94.1 1.0 CA B:LYS745 3.9 0.4 1.0 CD B:GLU786 4.0 79.8 1.0 O B:GLY746 4.0 74.0 1.0 C B:LYS745 4.1 84.7 1.0 CA B:GLY746 4.1 77.6 1.0 CE B:LYS745 4.3 1.0 1.0 C B:GLY746 4.3 75.4 1.0 NZ B:LYS745 4.3 0.7 1.0 C B:ARG744 4.6 91.3 1.0 CG B:LYS745 4.7 0.4 1.0 N B:LYS745 4.8 0.4 1.0 CB B:LYS745 4.8 0.1 1.0 OG1 B:THR747 4.9 94.5 1.0 O B:GLY741 5.0 70.9 1.0

G.Gogl, A.Cousido-Siah, G.Trave. MAGI1_2 Complexed with A Phosphomimetic RSK1 Peptide To Be Published.