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Calcium in PDB 2lc5: Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein

Calcium Binding Sites:

The binding sites of Calcium atom in the Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein (pdb code 2lc5). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein, PDB code: 2lc5:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2lc5

Go back to Calcium Binding Sites List in 2lc5
Calcium binding site 1 out of 2 in the Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca250

b:11.0
occ:1.00
OD2 A:ASP26 2.1 43.0 1.0
OD1 A:ASP24 2.5 22.2 1.0
CG A:ASP26 2.9 40.0 1.0
OD1 A:ASP26 3.0 22.3 1.0
HA A:ASP24 3.1 13.5 1.0
HD13 A:LEU31 3.3 13.1 1.0
OE2 A:GLU35 3.4 14.0 1.0
O A:LYS30 3.5 61.3 1.0
HD11 A:LEU31 3.6 14.4 1.0
CG A:ASP24 3.6 53.2 1.0
HB2 A:ASP28 3.7 23.2 1.0
HA A:LEU31 3.8 15.2 1.0
CD1 A:LEU31 3.9 2.1 1.0
CA A:ASP24 4.0 24.3 1.0
O A:PHE23 4.1 23.4 1.0
HG3 A:GLU35 4.1 53.4 1.0
H A:ASP26 4.1 0.2 1.0
CD A:GLU35 4.2 74.3 1.0
CB A:ASP24 4.2 54.3 1.0
HB2 A:ASP24 4.3 21.2 1.0
CB A:ASP26 4.3 64.3 1.0
HG22 A:THR32 4.4 32.5 1.0
HD12 A:LEU31 4.4 50.3 1.0
HB3 A:ASP26 4.5 73.3 1.0
H A:THR32 4.5 23.4 1.0
HD23 A:LEU31 4.6 64.4 1.0
H A:ASP28 4.6 4.3 1.0
OD2 A:ASP24 4.6 22.2 1.0
CB A:ASP28 4.6 51.4 1.0
C A:LYS30 4.7 65.4 1.0
CG A:ASP28 4.7 42.1 1.0
CG A:GLU35 4.7 63.1 1.0
C A:ASP24 4.8 50.5 1.0
H A:LYS25 4.8 54.1 1.0
CA A:LEU31 4.8 2.4 1.0
HB2 A:ASP26 4.9 23.2 1.0
N A:ASP26 4.9 10.2 1.0
C A:PHE23 5.0 51.4 1.0
H A:LYS30 5.0 1.4 1.0

Calcium binding site 2 out of 2 in 2lc5

Go back to Calcium Binding Sites List in 2lc5
Calcium binding site 2 out of 2 in the Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Calmodulin-Like Protein From Entamoeba Histolytica: Solution Structure and Calcium-Binding Properties of A Partially Folded Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca300

b:62.3
occ:1.00
HB2 A:ASN63 2.3 54.4 1.0
CB A:ASN63 3.1 3.3 1.0
HB3 A:ASP60 3.2 12.5 1.0
HB3 A:ASN63 3.3 71.4 1.0
OD2 A:ASP60 3.3 53.5 1.0
HA A:ASP60 3.3 74.1 1.0
OD1 A:ASN63 3.3 21.5 1.0
CG A:ASN63 3.4 24.1 1.0
CB A:ASP60 3.9 34.5 1.0
H A:SER64 3.9 53.2 1.0
CG A:ASP60 3.9 22.1 1.0
CA A:ASP60 4.1 40.4 1.0
CA A:ASN63 4.4 74.3 1.0
H A:ASN63 4.5 64.3 1.0
ND2 A:ASN63 4.5 23.4 1.0
OD2 A:ASP62 4.5 11.1 1.0
N A:ASN63 4.6 4.4 1.0
HG21 A:THR71 4.7 32.1 1.0
O A:TYR59 4.7 55.3 1.0
N A:SER64 4.7 53.4 1.0
C A:ASP60 4.9 72.3 1.0
O A:LYS66 4.9 5.4 1.0
HB2 A:ASP60 4.9 74.3 1.0
HD21 A:ASN63 4.9 50.3 1.0
OD1 A:ASP62 5.0 51.1 1.0
OD1 A:ASP60 5.0 74.3 1.0

Reference:

A.K.Rout, N.Padhan, R.P.Barnwal, A.Bhattacharya, K.V.Chary. Calmodulin Like Protein From Entamoeba Histolytica: Solution Structure and Calcium Binding Properties of A Partially Folded Protein. Biochemistry V. 50 181 2010.
ISSN: ISSN 0006-2960
PubMed: 21114322
DOI: 10.1021/BI101411Q
Page generated: Fri Jul 12 14:05:34 2024

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