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Calcium in PDB, part 239 (files: 9521-9560), PDB 5s5u-5sy1

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 9521-9560 (PDB 5s5u-5sy1).
  1. 5s5u (Ca: 4) - Tubulin-Z1124201124-Complex
    Other atoms: Mg (5);
  2. 5s5v (Ca: 4) - Tubulin-Z32386228-Complex
    Other atoms: Mg (5); Cl (1);
  3. 5s5w (Ca: 4) - Tubulin-Z53860899-Complex
    Other atoms: Mg (5);
  4. 5s5x (Ca: 4) - Tubulin-Z45705015-Complex
    Other atoms: F (1); Mg (5);
  5. 5s5y (Ca: 4) - Tubulin-Z26781952-Complex
    Other atoms: Mg (5);
  6. 5s5z (Ca: 4) - Tubulin-Z2856434944-Complex
    Other atoms: F (3); Mg (5);
  7. 5s60 (Ca: 4) - Tubulin-Z27695365-Complex
    Other atoms: Mg (5);
  8. 5s61 (Ca: 4) - Tubulin-Z57472297-Complex
    Other atoms: Mg (5);
  9. 5s62 (Ca: 4) - Tubulin-Z100642432-Complex
    Other atoms: F (1); Br (1); Mg (5);
  10. 5s63 (Ca: 4) - Tubulin-Z2241115980-Complex
    Other atoms: Mg (5);
  11. 5s64 (Ca: 4) - Tubulin-Z28870646-Complex
    Other atoms: Mg (5);
  12. 5s65 (Ca: 4) - Tubulin-Z1354416068-Complex
    Other atoms: Mg (5);
  13. 5s67 (Ca: 4) - Tubulin-Z1896597864-Complex
    Other atoms: Mg (5);
  14. 5s8o (Ca: 2) - Xchem Group Deposition -- Crystal Structure of the Second Bromodomain of Pleckstrin Homology Domain Interacting Protein (Phip) in Complex with N01460C (Space Group P212121)
    Other atoms: Cl (1);
  15. 5s8p (Ca: 2) - Xchem Group Deposition -- Crystal Structure of the Second Bromodomain of Pleckstrin Homology Domain Interacting Protein (Phip) in Complex with E07179C (Space Group P212121)
  16. 5s8q (Ca: 3) - Xchem Group Deposition -- Crystal Structure of the Second Bromodomain of Pleckstrin Homology Domain Interacting Protein (Phip) in Complex with FMO3D000185A (Space Group P212121)
  17. 5s9l (Ca: 2) - Autotaxin, 4-[3-Oxo-3-(2-Oxo-2,3-Dihydro-Benzooxazol-6-Yl)-Propyl]- Piperazine-1-Carboxylic Acid 3,5-Dichloro-Benzyl Ester, 1.90A, P212121, Rfree=19.1%
    Other atoms: Cl (2); Zn (1); K (1); Na (1);
  18. 5s9m (Ca: 3) - Autotaxin, (3,5-Dichlorophenyl)Methyl (3AS,8AR)-2-(1H-Benzotriazole-5- Carbonyl)-1,3,3A,4,5,7,8,8A-Octahydropyrrolo[3,4-D]Azepine-6- Carboxylate, 1.80A, P212121, Rfree=21.1%
    Other atoms: Zn (2); Cl (3); Na (1);
  19. 5s9n (Ca: 2) - Autotaxin, [4-(Trifluoromethoxy)Phenyl]Methyl (3AS,6AS)-2-(1H- Benzotriazole-5-Carbonyl)-1,3,3A,4,6,6A-Hexahydropyrrolo[3,4- C]Pyrrole-5-Carboxylate, 1.80A, P212121, Rfree=23.3%
    Other atoms: Cl (4); Zn (1); Na (1); F (3);
  20. 5sb3 (Ca: 4) - Tubulin-Todalam-4-Complex
    Other atoms: Mg (5);
  21. 5sb4 (Ca: 4) - Tubulin-Todalam-8-Complex
    Other atoms: F (1); Mg (5);
  22. 5sb5 (Ca: 4) - Tubulin-Todalam-9-Complex
    Other atoms: Mg (5); F (1);
  23. 5sb6 (Ca: 4) - Tubulin-Todalam-10-Complex
    Other atoms: F (1); Mg (5);
  24. 5sb7 (Ca: 4) - Tubulin-Todalam-18-Complex
    Other atoms: F (3); Mg (5);
  25. 5sb8 (Ca: 3) - Tubulin-Maytansinoid-3-Complex
    Other atoms: Mg (5); Cl (1);
  26. 5sb9 (Ca: 3) - Tubulin-Maytansinoid-4A-Complex
    Other atoms: Cl (1); Mg (5);
  27. 5sba (Ca: 3) - Tubulin-Maytansinoid-4B-Complex
    Other atoms: Mg (5); Cl (1);
  28. 5sbb (Ca: 4) - Tubulin-Maytansinoid-4C-Complex
    Other atoms: Cl (1); Mg (5);
  29. 5sbc (Ca: 4) - Tubulin-Maytansinoid-5A-Complex
    Other atoms: Mg (5); Cl (1);
  30. 5sbd (Ca: 4) - Tubulin-Maytansinoid-5B-Complex
    Other atoms: Mg (5); Cl (1);
  31. 5sbe (Ca: 3) - Tubulin-Maytansinoid-5C-Complex
    Other atoms: Mg (5); Cl (1);
  32. 5sic (Ca: 2) - Molecular Recognition at the Active Site of Subtilisin Bpn': Crystallographic Studies Using Genetically Engineered Proteinaceous Inhibitor Ssi (Streptomyces Subtilisin Inhibitor)
  33. 5ssx (Ca: 3) - Crystal Structure Human Formylglycine Generating Enzyme E130D Mutant
    Other atoms: Cu (1);
  34. 5ssy (Ca: 2) - Crystal Structure of Human Formylglycine Generating Enzyme
    Other atoms: Cu (1);
  35. 5ssz (Ca: 2) - Crystal Structure of Wild-Type Human Formylglycine Generating Enzyme Bound to Cu(I)
    Other atoms: Cu (1);
  36. 5std (Ca: 3) - Scytalone Dehydratase Plus Inhibitor 2
    Other atoms: F (6);
  37. 5sv0 (Ca: 2) - Structure of the Exbb/Exbd Complex From E. Coli at pH 7.0
  38. 5sve (Ca: 4) - Structure of Calcineurin in Complex with NFATC1 Lxvp Peptide
    Other atoms: Fe (1); Zn (1);
  39. 5swi (Ca: 4) - Crystal Structure of SPGH92 in Complex with Mannose
  40. 5sy1 (Ca: 8) - Structure of the STRA6 Receptor For Retinol Uptake in Complex with Calmodulin
Page generated: Thu Dec 28 01:24:34 2023

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