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Calcium in PDB, part 354 (files: 14121-14160), PDB 8ica-8iww

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 14121-14160 (PDB 8ica-8iww).
  1. 8ica (Ca: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Seven Base Pairs of Dna; Soaked in the Presence of Datp (1 Millimolar) and CACL2 (5 Millimolar)
    Other atoms: Na (2);
  2. 8ids (Ca: 2) - Crystal Structure of Bacillus Sp. AHU2216 GH13_31 Alpha-Glucosidase E256Q/N258P in Complex with Maltotriose
  3. 8if8 (Ca: 2) - Arabinosyltransferase Afta
  4. 8ihn (Ca: 1) - Cryo-Em Structure of the RPD3S Core Complex
    Other atoms: Zn (1);
  5. 8iht (Ca: 1) - RPD3S Bound to the Nucleosome
    Other atoms: Zn (1);
  6. 8ihw (Ca: 1) - X-Ray Crystal Structure of D43R Mutant of Endo-1,4-Beta Glucanase From Eisenia Fetida
    Other atoms: Mg (1);
  7. 8ihx (Ca: 1) - X-Ray Crystal Structure of N372D Mutant of Endo-1,4-Beta Glucanase From Eisenia Fetida
    Other atoms: Na (1); Mg (1);
  8. 8ihy (Ca: 1) - X-Ray Crystal Structure of Q387E Mutant of Endo-1,4-Beta Glucanase From Eisenia Fetida
    Other atoms: Mg (1); Na (1);
  9. 8ii2 (Ca: 1) - Crystal Structure of V30M-Ttr in Complex with Bbm
    Other atoms: Br (4);
  10. 8im8 (Ca: 8) - Crystal Structure of Periplasmic Alpha-Amylase (Mals) From E.Coli
  11. 8imx (Ca: 1) - Cryo-Em Structure of Gpi-T with A Chimeric Gpi-Anchored Protein
    Other atoms: Mg (1);
  12. 8imy (Ca: 1) - Cryo-Em Structure of Gpi-T (Inactive Mutant) with Gpi and PROULBP2, A Proprotein Substrate
    Other atoms: Mg (1);
  13. 8ing (Ca: 1) - Structure of the Ternary Complex of Lactoperoxidase with Substrate Nitric Oxide (No) and Product Nitrite Ion (NO2) at 1.98 A Resolution
    Other atoms: I (13); Na (2); Fe (1);
  14. 8inr (Ca: 1) - Cryo-Em Structure of the Alpha-Msh-Bound Human Melanocortin Receptor 5 (MC5R)-Gs Complex
  15. 8ioc (Ca: 1) - Cryo-Em Structure of the Gamma-Msh-Bound Human Melanocortin Receptor 3 (MC3R)-Gs Complex
  16. 8iod (Ca: 1) - Cryo-Em Structure of the Pg-901-Bound Human Melanocortin Receptor 5 (MC5R)-Gs Complex
  17. 8ir5 (Ca: 9) - Xfel Structure of Cyanobacterial Photosystem II Under Dark Conditions
    Other atoms: Cl (4); Mn (8); Mg (72); Fe (6);
  18. 8ir6 (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 20-Nanosecond Delay
    Other atoms: Cl (8); Mn (16); Mg (80); Fe (8);
  19. 8ir7 (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 200-Nanosecond Delay
    Other atoms: Fe (8); Mg (80); Mn (16); Cl (8);
  20. 8ir8 (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 1-Microsecond Delay
    Other atoms: Fe (8); Mg (80); Mn (16); Cl (8);
  21. 8ir9 (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 30-Microsecond Delay
    Other atoms: Fe (8); Mg (80); Mn (16); Cl (8);
  22. 8ira (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 200-Microsecond Delay
    Other atoms: Fe (8); Cl (8); Mn (16); Mg (80);
  23. 8irb (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 5-Millisecond Delay
    Other atoms: Mn (16); Cl (8); Mg (80); Fe (8);
  24. 8irc (Ca: 9) - Xfel Structure of Cyanobacterial Photosystem II Following One Flash (1F) with A 5-Millisecond Delay (Single Conformation)
    Other atoms: Cl (4); Mn (8); Mg (72); Fe (6);
  25. 8ird (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following Two Flashes (2F) with A 20-Nanosecond Delay
    Other atoms: Fe (8); Mg (80); Cl (8); Mn (16);
  26. 8ire (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following Two Flashes (2F) with A 200-Nanosecond Delay
    Other atoms: Fe (8); Mg (80); Cl (8); Mn (16);
  27. 8irf (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following Two Flashes (2F) with A 1-Microsecond Delay
    Other atoms: Mn (16); Mg (80); Cl (8); Fe (8);
  28. 8irg (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following Two Flashes (2F) with A 30-Microsecond Delay
    Other atoms: Fe (8); Mg (80); Cl (8); Mn (16);
  29. 8irh (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following Two Flashes (2F) with A 200-Microsecond Delay
    Other atoms: Fe (8); Mg (80); Cl (8); Mn (16);
  30. 8iri (Ca: 11) - Xfel Structure of Cyanobacterial Photosystem II Following Two Flashes (2F) with A 5-Millisecond Delay
    Other atoms: Fe (8); Mg (80); Mn (16); Cl (8);
  31. 8itg (Ca: 1) - Crystal Structure of Lasso Peptide Epimerase Mslh in Complexed with Precursor Peptide Variant MSLAW21G
  32. 8ith (Ca: 1) - Crystal Structure of Lasso Peptide Epimerase Mslh H295N
  33. 8iug (Ca: 1) - Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
    Other atoms: Mg (48); Fe (4); Mn (1);
  34. 8iun (Ca: 1) - Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
    Other atoms: Mn (1); Fe (4); Mg (48);
  35. 8iw5 (Ca: 1) - Crystal Structure of Liprin-Beta H2H3 Dimer
  36. 8iwh (Ca: 2) - Structure and Characteristics of A Photosystem II Supercomplex Containing Monomeric Lhcx and Dimeric Fcpii Antennae From the Diatom Thalassiosira Pseudonana
    Other atoms: Mn (8); Fe (6); Cl (2); Mg (191);
  37. 8iwp (Ca: 1) - HSPCA1 in the CAE1 State
  38. 8iwr (Ca: 1) - HSPCA1 in the CAE1-Atp State
    Other atoms: Mg (1);
  39. 8iws (Ca: 1) - HSPCA1 in the CAE2P State
    Other atoms: Mg (1); F (3);
  40. 8iww (Ca: 1) - HSPCA1 in the CAE1P-Adp State
    Other atoms: F (4); Al (1);
Page generated: Thu Jul 10 05:13:27 2025

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