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Calcium in PDB, part 339 (files: 13521-13560), PDB 8d1o-8dvn

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 13521-13560 (PDB 8d1o-8dvn).
  1. 8d1o (Ca: 5) - HBEST1_345 CA2+-Bound Open State
  2. 8d33 (Ca: 1) - Human Mitochondrial Dna Polymerase Gamma Ternary Complex with Gc Basepair
  3. 8d37 (Ca: 1) - Human Mitochondrial Dna Polymerase Gamma Ternary Complex with Gt Basepair in Replication Conformer
  4. 8d3r (Ca: 1) - Human Mitochondrial Dna Polymerase Gamma Ternary Complex with Gt Basepair in Intermediate Conformer
  5. 8d42 (Ca: 3) - Human Mitochondrial Dna Polymerase Gamma Ternary Complex with Gt Basepair in Editing Conformer (Composite)
  6. 8d43 (Ca: 2) - Cryo-Em Structure of Human Kidney Glucosidase II
  7. 8d5l (Ca: 5) - Crystal Structure of Theophylline Aptamer in Complex with TAL1
    Other atoms: Mg (6); Na (4);
  8. 8d8m (Ca: 2) - Isoreticular, Interpenetrating Co-Crystal of Replication Initiator Protein REPE54 and Symmetrical Expanded Duplex (31MER) Containing the Cognate REPE54 Sequence and An Additional G-C Rich Sequence Grown in A Calcium Chloride Crystallization Solution.
  9. 8d94 (Ca: 4) - SAMHD1-Dna Complex
    Other atoms: Fe (4);
  10. 8d9j (Ca: 4) - SAMHD1-Dna Complex
    Other atoms: Fe (4);
  11. 8db6 (Ca: 4) - Adenosine/Guanosine Nucleoside Hydrolase
  12. 8db7 (Ca: 4) - Adenosine/Guanosine Nucleoside Hydrolase Bound to A Fragment Inhibitor
    Other atoms: F (3);
  13. 8db8 (Ca: 4) - Adenosine/Guanosine Nucleoside Hydrolase Bound to Imh
  14. 8db9 (Ca: 4) - Adenosine/Guanosine Nucleoside Hydrolase Bound to Inhibitor
  15. 8deo (Ca: 2) - Structure of Aap A Domain and B-Repeats (Residues 351-813) From Staphylococcus Epidermidis
    Other atoms: Cl (2);
  16. 8df2 (Ca: 4) - The Structure of the 'Alt' Construct of the AMUC_1438 Glycopeptidase
    Other atoms: Na (12); Zn (4);
  17. 8dfr (Ca: 1) - Refined Crystal Structures of Chicken Liver Dihydrofolate Reductase. 3 Angstroms Apo-Enzyme and 1.7 Angstroms Nadph Holo-Enzyme Complex
  18. 8dfv (Ca: 10) - Structural Basis of Microrna Biogenesis By Dicer-1 and Its Partner Protein Loqs-Pb - Complex Iia
  19. 8dge (Ca: 4) - BOGH13ASUS From Bacteroides Ovatus
    Other atoms: Mn (4);
  20. 8dh6 (Ca: 1) - Cryo-Em Structure of Saccharomyces Cerevisiae Cytochrome C Oxidase (Complex IV) Extracted in Lipid Nanodiscs
    Other atoms: Fe (2); Zn (1); Cu (2); Mg (1);
  21. 8dhl (Ca: 4) - Tannerella Forsythia Beta-Glucuronidase (L2)
    Other atoms: Na (2);
  22. 8diq (Ca: 2) - Tubulin-RB3_SLD-Ttl in Complex with SB226
    Other atoms: Mg (5);
  23. 8djf (Ca: 1) - Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Tetrahedral Intermediate
    Other atoms: Na (1);
  24. 8djz (Ca: 1) - Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound Product
    Other atoms: Na (1);
  25. 8dk0 (Ca: 1) - Crystal Structure of RPA3624, A Beta-Propeller Lactonase From Rhodopseudomonas Palustris, with Active-Site Bound (S)Gamma- Valerolactone
    Other atoms: Na (1);
  26. 8dl1 (Ca: 4) - BOGH13ASUS-E523Q From Bacteroides Ovatus Bound to Maltoheptaose
    Other atoms: Mn (4); Cl (1); Na (1);
  27. 8dl2 (Ca: 4) - BOGH13ASUS From Bacteroides Ovatus Bound to Acarbose
    Other atoms: Mn (4); Cl (1);
  28. 8dl6 (Ca: 1) - Cryo-Em Structure of Human Ferroportin/SLC40 Bound to CA2+ in Nanodisc
  29. 8dmk (Ca: 1) - Cryo-Em Reveals the Molecular Basis of Laminin Polymerization and Ln- Lamininopathies
  30. 8dml (Ca: 4) - Vibrio Parahaemolyticus Vtra/Vtrc Complex Bound to the Bile Salt Chenodeoxycholate
  31. 8dos (Ca: 2) - Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae
    Other atoms: Mg (1);
  32. 8dqo (Ca: 2) - Crystal Structure of Arabidopsis Thaliana Cosy
  33. 8dqp (Ca: 2) - Crystal Structure of Arabidopsis Thaliana Cosy in Complex with Scopoletin
  34. 8dqq (Ca: 2) - Crystal Structure of Arabidopsis Thaliana Cosy in Complex with Scopoletin
  35. 8dqr (Ca: 1) - Crystal Structure of Arabidopsis Thaliana Cosy in Complex with Scopoletin
  36. 8dt6 (Ca: 9) - Crystal Structure of Dna Polymerase III Beta Subunit From Elizabethkingia Anophelis
    Other atoms: Na (2); Cl (2);
  37. 8dta (Ca: 1) - Metal Sensitive Gfp (Msegfp) Complexed with Phenylarsine Oxide.
    Other atoms: As (1);
  38. 8dvl (Ca: 3) - Crystal Structure of LRP6 E3E4 in Complex with Disulfide Constrained Peptide E3.18
  39. 8dvm (Ca: 3) - Crystal Structure of LRP6 E3E4 in Complex with Disulfide Constrained Peptide E3.6
  40. 8dvn (Ca: 4) - Crystal Structure of LRP6 E3E4 in Complex with Disulfide Constrained Peptide E3.10
Page generated: Fri Jul 28 11:11:01 2023

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