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Calcium in PDB, part 258 (files: 10281-10320), PDB 6dbi-6dxg

Experimental structures of coordination spheres of Calcium (Ca) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Calcium atoms. PDB files: 10281-10320 (PDB 6dbi-6dxg).
  1. 6dbi (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Nicked Dna Intermediates
    Other atoms: Zn (2);
  2. 6dbj (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Nicked Dna Intermediates
    Other atoms: Zn (2);
  3. 6dbl (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Substrate Dnas
    Other atoms: Zn (2);
  4. 6dbo (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Substrate Dnas
    Other atoms: Zn (2);
  5. 6dbq (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Substrate Dnas
    Other atoms: Zn (2);
  6. 6dbr (Ca: 4) - Cryo-Em Structure of Rag in Complex with One Melted Rss and One Unmelted Rss
    Other atoms: Zn (2);
  7. 6dbt (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Substrate Dnas
    Other atoms: Zn (2);
  8. 6dbu (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Substrate Dnas
    Other atoms: Zn (2);
  9. 6dbv (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss and 23-Rss Substrate Dnas
    Other atoms: Zn (2);
  10. 6dbw (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss Substrate Dna
    Other atoms: Zn (2);
  11. 6dbx (Ca: 4) - Cryo-Em Structure of Rag in Complex with 12-Rss Substrate Dna
    Other atoms: Zn (2);
  12. 6ddt (Ca: 1) - Mouse Beta-Mannosidase (Manba)
  13. 6ddu (Ca: 1) - Mouse Beta-Mannosidase Bound to Beta-D-Mannose (Manba)
  14. 6de4 (Ca: 2) - Homo Sapiens Dihydrofolate Reductase Complexed with Beta-Nadph and 3'- [(2R)-4-(2,4-Diamino-6-Ethylphenyl)But-3-Yn-2-Yl]-5'-Methoxy-[1,1'- Biphenyl]-4-Carboxylic Acid
    Other atoms: Cl (2);
  15. 6dec (Ca: 4) - Crystal Structure of Bos Taurus ARP2/3 Complex Binding with C-Terminus of Homo Sapiens SPIN90
  16. 6dfq (Ca: 1) - Mouse Diabetogenic Tcr I.29
  17. 6dfr (Ca: 1) - Crystal Structures of Escherichia Coli Dihydrofolate Reductase. the Nadp+ Holoenzyme and the Folate(Dot)Nadp+ Ternary Complex. Substrate Binding and A Model For the Transition State
  18. 6dgm (Ca: 2) - Streptococcus Pyogenes Phosphoglycerol Transferase Gach in Complex with Sn-Glycerol-1-Phosphate
    Other atoms: Mn (2);
  19. 6dhb (Ca: 1) - Crystal Structure of the Human Tim-3 with Bound Calcium
  20. 6dht (Ca: 2) - Bacteroides Ovatus GH9 BACOVA_02649
    Other atoms: Mg (1); Cl (2);
  21. 6dhy (Ca: 3) - Crystallogrpahic Tetramer of Zn-Bound RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
    Other atoms: Fe (4); Zn (10);
  22. 6dhz (Ca: 7) - Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
    Other atoms: Fe (4);
  23. 6dia (Ca: 3) - Dna Polymerase Beta Substrate Complex with Templating Cytosine and Incoming Fapy-Dgtp Analog
    Other atoms: Na (2);
  24. 6dic (Ca: 3) - D276G Dna Polymerase Beta Substrate Complex with Templating Cytosine and Incoming Fapy-Dgtp Analog
    Other atoms: Cl (3); Na (4);
  25. 6dlh (Ca: 5) - Endo-Fucoidan Hydrolase MFFCNA4 From Glycoside Hydrolase Family 107
    Other atoms: Na (1);
  26. 6dmn (Ca: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Soaked in 2 Mm CA2+ and 200 Mm K+ at 21 C
    Other atoms: K (1); I (4);
  27. 6dms (Ca: 2) - Endo-Fucoidan Hydrolase MFFCNA4_H294Q From Glycoside Hydrolase Family 107
  28. 6dmw (Ca: 3) - Calmodulin-Bound Full-Length RBTRPV5
  29. 6dmy (Ca: 2) - Cryo-Em Structure of Human PTCH1 and Shhn Complex
    Other atoms: Zn (1);
  30. 6dnf (Ca: 3) - Cryo-Em Structure of the Mitochondrial Calcium Uniporter Mcu From the Fungus Cyphellophora Europaea
  31. 6dns (Ca: 5) - Endo-Fucoidan Hydrolase MFFCNA9 From Glycoside Hydrolase Family 107
  32. 6doh (Ca: 1) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Soak in 0.5 Mm Egta and 200 Mm K+ at 21 C
    Other atoms: K (3); I (4);
  33. 6doi (Ca: 1) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid (1.54 Angstrom Wavelength): Soak in 0.5 Mm Egta and 200 Mm K+ at 21 C
    Other atoms: K (3); I (4);
  34. 6drj (Ca: 4) - Structure of TRPM2 Ion Channel Receptor By Single Particle Electron Cryo-Microscopy, Adpr/CA2+ Bound State
  35. 6dt0 (Ca: 1) - Cryo-Em Structure of A Mitochondrial Calcium Uniporter
  36. 6dwo (Ca: 4) - Crystal Structure of Alpha-1-2-Mannosidase From Enterococcus Faecalis V583
    Other atoms: K (4);
  37. 6dwq (Ca: 2) - Subtilisin Serine Protease Modified with the Protease Inhibitor Cyanobenzylsulfonylfluoride
  38. 6dwr (Ca: 4) - Trypsin Serine Protease Modified with the Protease Inhibitor Cyanobenzylsulfonylfluoride
  39. 6dwy (Ca: 1) - Hermes Transposase Deletion Dimer Complex with (C/G) Dna and CA2+
  40. 6dxg (Ca: 1) - Amidobenzimidazole (Abzi) Sting Agonists
Page generated: Sat Apr 17 13:48:13 2021

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